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来自大、小酵母线粒体RNA的转录、加工及图谱分析

Transcription, processing, and mapping of mitochondrial RNA from grande and petite yeast.

作者信息

Morimoto R, Locker J, Synenki R M, Rabinowitz M

出版信息

J Biol Chem. 1979 Dec 25;254(24):12461-70.

PMID:387787
Abstract

Mitochondrial RNA (mtRNA) from petite yeast strains was analyzed by electrophoresis in agarose-urea, acrylamide-urea, and agarose-methyl mercuric hydroxide gels, and by transfer to diazobenzyloxy-methyl paper and hybridization to labeled mitochondrial DNA (mtDNA). Petites contain numerous mitochondrial transcripts, including processed species like 21 S and 14 S rRNA. Petite transcripts were found to fall into three classes: 1) bands that comigrate with grande mtRNA species; 2) "group-specific" new bands found in multiple strains and coinciding with specific regions of the mitochondrial genome; and 3) "strain-specific" new bands found only in individual petite strains. A deletion map was constructed in which we used the presence or absence of the first two types of mtRNA bands in specific strains, and the restriction endonuclease map of these strains. This map confirmed the localization of 21 S and 14 S rRNA, which were mapped previously by hybridization, and also localized more than 20 additional mtRNA species. The mtRNA species were grouped in regions of the genome in a fashion that strongly suggests that many of them are precursors to fully processed mtRNA species. Hybridization experiments with grande mtRNA and cloned mtDNA fragments have shown the same kind of transcript grouping. Other hybridization experiments have demonstrated two apparent precursors to 21 S rRNA (3700 nucleotides) measuring 5500 and 4500 nucleotides. Processed tRNAs are found only in petites that contain a specific region of the genome near the P (paromomycin resistance) locus. When this region is absent, processed tRNAs are not detected, even for tRNA genes quite distant from the P locus. Since this phenotype is expressed in petites that lack mitochondrial protein synthesis, and since it maps to a specific location in the mitochondrial genome, there appears to be a mtRNA species which has a role in processing of mitochondrial tRNA.

摘要

利用琼脂糖-尿素凝胶、丙烯酰胺-尿素凝胶和琼脂糖-氢氧化甲基汞凝胶电泳,以及转移至重氮苄氧基甲基纸上并与标记的线粒体DNA(mtDNA)杂交的方法,对小菌落酵母菌株的线粒体RNA(mtRNA)进行了分析。小菌落含有众多线粒体转录本,包括如21S和14S rRNA等加工后的种类。发现小菌落转录本可分为三类:1)与大菌落mtRNA种类共迁移的条带;2)在多个菌株中发现的“组特异性”新条带,与线粒体基因组的特定区域一致;3)仅在个别小菌落菌株中发现的“菌株特异性”新条带。构建了一个缺失图谱,我们利用特定菌株中前两类mtRNA条带的有无以及这些菌株的限制性内切酶图谱。该图谱证实了先前通过杂交定位的21S和14S rRNA的定位,还定位了另外20多种mtRNA种类。mtRNA种类在基因组区域中分组的方式强烈表明,其中许多是完全加工后的mtRNA种类的前体。用大菌落mtRNA和克隆的mtDNA片段进行的杂交实验显示了相同类型的转录本分组。其他杂交实验证明了两个明显的21S rRNA前体(3700个核苷酸),大小分别为5500和4500个核苷酸。加工后的tRNA仅在含有靠近P(巴龙霉素抗性)位点的基因组特定区域的小菌落中发现。当该区域缺失时,即使对于距离P位点很远的tRNA基因,也检测不到加工后的tRNA。由于这种表型在缺乏线粒体蛋白质合成的小菌落中表达,并且由于它定位于线粒体基因组的特定位置,似乎存在一种mtRNA种类,它在线粒体tRNA的加工中起作用。

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