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大豆基因家族成员的全基因组鉴定及其在盐碱胁迫响应中的功能作用表征

Genome-Wide Identification of Members of the Soybean Gene Family and Characterization of the Functional Role of in Responses to Saline and Alkaline Stress.

作者信息

Jiao Feng, Zhang Dongdong, Chen Yang, Wu Jinhua

机构信息

College of Agriculture, Heilongjiang Bayi Agricultural University, Daqing 163319, China.

出版信息

Plants (Basel). 2024 May 9;13(10):1304. doi: 10.3390/plants13101304.

DOI:10.3390/plants13101304
PMID:38794375
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11124892/
Abstract

Calcium ions function as key messengers in the context of intracellular signal transduction. The ability of plants to respond to biotic and abiotic stressors is highly dependent on the calcineurin B-like protein (CBL) and CBL-interacting protein kinase (CIPK) signaling network. Here, a comprehensive effort was made to identify all members of the soybean gene family, leading to the identification of 15 total genes distributed randomly across nine chromosomes, including 13 segmental duplicates. All the gene subfamilies presented with similar gene structures and conserved motifs. Analyses of the expression of these genes in different tissues revealed that the majority of these were predominantly expressed in the roots. Significant expression and activity increases were also observed in response to a range of stress-related treatments, including salt stress, alkaline stress, osmotic stress, or exposure to salicylic acid, brassinosteroids, or abscisic acid. Striking increases in expression were observed in response to alkaline and salt stress. Subsequent analyses revealed that was capable of enhancing soybean salt and alkali tolerance through the regulation of redox reactions. These results offer new insight into the complex mechanisms through which the soybean gene family regulates the responses of these plants to environmental stressors, highlighting promising targets for efforts aimed at enhancing soybean stress tolerance.

摘要

钙离子在细胞内信号转导过程中发挥关键信使的作用。植物对生物和非生物胁迫作出反应的能力高度依赖于类钙调神经磷酸酶B蛋白(CBL)和CBL相互作用蛋白激酶(CIPK)信号网络。在此,我们进行了全面的研究以鉴定大豆该基因家族的所有成员,共鉴定出15个基因,它们随机分布在9条染色体上,其中包括13个片段重复基因。所有该基因亚家族都具有相似的基因结构和保守基序。对这些基因在不同组织中的表达分析表明,这些基因中的大多数主要在根中表达。在一系列与胁迫相关的处理中,包括盐胁迫、碱胁迫、渗透胁迫或暴露于水杨酸、油菜素内酯或脱落酸,也观察到了显著的该基因表达和活性增加。在碱胁迫和盐胁迫下观察到该基因表达显著增加。随后的分析表明,该基因能够通过调节氧化还原反应来增强大豆的耐盐碱性。这些结果为大豆该基因家族调控这些植物对环境胁迫反应的复杂机制提供了新的见解,突出了旨在提高大豆胁迫耐受性的研究中有前景的靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/977bd24f980c/plants-13-01304-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/bc0fee6635cc/plants-13-01304-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/80d70a209f58/plants-13-01304-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/446710a0a70a/plants-13-01304-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/cc571a2f43b2/plants-13-01304-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/55e3775aaebb/plants-13-01304-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/a544bdfdf57a/plants-13-01304-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/e4dc1c17634a/plants-13-01304-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/55d33ac4017c/plants-13-01304-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/e15a04f68628/plants-13-01304-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/977bd24f980c/plants-13-01304-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/bc0fee6635cc/plants-13-01304-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/80d70a209f58/plants-13-01304-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/446710a0a70a/plants-13-01304-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/cc571a2f43b2/plants-13-01304-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/55e3775aaebb/plants-13-01304-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/a544bdfdf57a/plants-13-01304-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/e4dc1c17634a/plants-13-01304-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/55d33ac4017c/plants-13-01304-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/e15a04f68628/plants-13-01304-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d622/11124892/977bd24f980c/plants-13-01304-g010.jpg

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本文引用的文献

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