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作为癌症靶点的SETDB1:药物设计中的挑战与前景

SETDB1 as a cancer target: challenges and perspectives in drug design.

作者信息

Hassanie Haifa, Penteado André Berndt, de Almeida Larissa Costa, Calil Raisa Ludmila, da Silva Emery Flávio, Costa-Lotufo Leticia Veras, Trossini Gustavo Henrique Goulart

机构信息

School of Pharmaceutical Sciences, University of São Paulo Brazil

Institute of Biomedical Sciences, University of São Paulo Brazil.

出版信息

RSC Med Chem. 2024 Mar 19;15(5):1424-1451. doi: 10.1039/d3md00366c. eCollection 2024 May 22.

DOI:10.1039/d3md00366c
PMID:38799223
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11113007/
Abstract

Genome stability is governed by chromatin structural dynamics, which modify DNA accessibility under the influence of intra- and inter-nucleosomal contacts, histone post-translational modifications (PTMs) and variations, besides the activity of ATP-dependent chromatin remodelers. These are the main ways by which chromatin dynamics are regulated and connected to nuclear processes, which when dysregulated can frequently be associated with most malignancies. Recently, functional crosstalk between histone modifications and chromatin remodeling has emerged as a critical regulatory method of transcriptional regulation during cell destiny choice. Therefore, improving therapeutic outcomes for patients by focusing on epigenetic targets dysregulated in malignancies should help prevent cancer cells from developing resistance to anticancer treatments. For this reason, SET domain bifurcated histone lysine methyltransferase 1 (SETDB1) has gained a lot of attention recently as a cancer target. SETDB1 is a histone lysine methyltransferase that plays an important role in marking euchromatic and heterochromatic regions. Hence, it promotes the silencing of tumor suppressor genes and contributes to carcinogenesis. Some studies revealed that SETDB1 was overexpressed in various human cancer types, which enhanced tumor growth and metastasis. Thus, SETDB1 appears to be an attractive epigenetic target for new cancer treatments. In this review, we have discussed the effects of its overexpression on the progression of tumors and the development of inhibitor drugs that specifically target this enzyme.

摘要

基因组稳定性受染色质结构动力学调控,在核小体内部和之间的接触、组蛋白翻译后修饰(PTMs)及变异的影响下,染色质结构动力学可改变DNA的可及性,此外还受ATP依赖的染色质重塑因子活性的影响。这些是调控染色质动力学并将其与核过程相联系的主要方式,当这些调控失调时,常与大多数恶性肿瘤相关。最近,组蛋白修饰与染色质重塑之间的功能串扰已成为细胞命运选择过程中转录调控的关键调节方法。因此,通过关注恶性肿瘤中失调的表观遗传靶点来改善患者的治疗效果,应有助于防止癌细胞对抗癌治疗产生耐药性。出于这个原因,SET结构域分叉组蛋白赖氨酸甲基转移酶1(SETDB1)作为一个癌症靶点最近受到了广泛关注。SETDB1是一种组蛋白赖氨酸甲基转移酶,在标记常染色质和异染色质区域中起重要作用。因此,它促进肿瘤抑制基因的沉默并有助于致癌作用。一些研究表明,SETDB1在多种人类癌症类型中过表达,这增强了肿瘤的生长和转移。因此,SETDB1似乎是新型癌症治疗中一个有吸引力的表观遗传靶点。在这篇综述中,我们讨论了其过表达对肿瘤进展的影响以及特异性靶向该酶的抑制剂药物的研发情况。

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SETDB1 as a cancer target: challenges and perspectives in drug design.作为癌症靶点的SETDB1:药物设计中的挑战与前景
RSC Med Chem. 2024 Mar 19;15(5):1424-1451. doi: 10.1039/d3md00366c. eCollection 2024 May 22.
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The function of histone methyltransferase SETDB1 and its roles in liver cancer.组蛋白甲基转移酶SETDB1的功能及其在肝癌中的作用。
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Histone Methyltransferase SETDB1: A Common Denominator of Tumorigenesis with Therapeutic Potential.组蛋白甲基转移酶 SETDB1:具有治疗潜力的肿瘤发生的共同特征。
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Histone methyltransferase SETDB1 contributes to melanoma tumorigenesis and serves as a new potential therapeutic target.组蛋白甲基转移酶 SETDB1 促进黑色素瘤肿瘤发生,可作为新的潜在治疗靶点。
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Targeting SETDB1 in cancer and immune regulation: Potential therapeutic strategies in cancer.靶向SETDB1在癌症与免疫调节中的作用:癌症的潜在治疗策略
Kaohsiung J Med Sci. 2025 Mar;41(3):e12933. doi: 10.1002/kjm2.12933. Epub 2025 Jan 7.
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Ubiquitination of Lysine 867 of the Human SETDB1 Protein Upregulates Its Histone H3 Lysine 9 (H3K9) Methyltransferase Activity.人类SETDB1蛋白赖氨酸867位点的泛素化上调其组蛋白H3赖氨酸9(H3K9)甲基转移酶活性。
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SETDB1, an H3K9-specific methyltransferase: An attractive epigenetic target to combat cancer.SETDB1,一种H3K9特异性甲基转移酶:对抗癌症的一个有吸引力的表观遗传靶点。
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Emerging role of SETDB1 as a therapeutic target.SETDB1作为治疗靶点的新作用。
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Up-regulation of histone methyltransferase SETDB1 by multiple mechanisms in hepatocellular carcinoma promotes cancer metastasis.多种机制上调肝癌中组蛋白甲基转移酶 SETDB1 促进癌症转移。
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Histone methyltransferase SETDB1 inhibits TGF-β-induced epithelial-mesenchymal transition in pulmonary fibrosis by regulating SNAI1 expression and the ferroptosis signaling pathway.组蛋白甲基转移酶SETDB1通过调节SNAI1表达和铁死亡信号通路抑制转化生长因子-β诱导的肺纤维化上皮-间质转化。
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Front Cell Dev Biol. 2025 Mar 25;13:1544310. doi: 10.3389/fcell.2025.1544310. eCollection 2025.
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Potent and selective SETDB1 covalent negative allosteric modulator reduces methyltransferase activity in cells.强效且选择性的SETDB1共价负变构调节剂可降低细胞中的甲基转移酶活性。
Nat Commun. 2025 Feb 24;16(1):1905. doi: 10.1038/s41467-025-57005-3.
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Targeting SETDB1 in cancer and immune regulation: Potential therapeutic strategies in cancer.靶向SETDB1在癌症与免疫调节中的作用:癌症的潜在治疗策略
Kaohsiung J Med Sci. 2025 Mar;41(3):e12933. doi: 10.1002/kjm2.12933. Epub 2025 Jan 7.
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SETDB1: an emerging target for anticancer drug development.SETDB1:抗癌药物研发的新兴靶点。
Future Med Chem. 2025 Jan;17(2):153-155. doi: 10.1080/17568919.2024.2444869. Epub 2024 Dec 25.

本文引用的文献

1
Targeting epigenetic regulators to overcome drug resistance in cancers.靶向表观遗传调控因子以克服癌症中的耐药性。
Signal Transduct Target Ther. 2023 Feb 17;8(1):69. doi: 10.1038/s41392-023-01341-7.
2
Mutant p53 in cancer: from molecular mechanism to therapeutic modulation.癌症中的突变型 p53:从分子机制到治疗调节。
Cell Death Dis. 2022 Nov 18;13(11):974. doi: 10.1038/s41419-022-05408-1.
3
mTOR regulates T cell exhaustion and PD-1-targeted immunotherapy response during chronic viral infection.mTOR 调控慢性病毒感染期间 T 细胞耗竭和 PD-1 靶向免疫治疗反应。
J Clin Invest. 2023 Jan 17;133(2):e160025. doi: 10.1172/JCI160025.
4
Sp1-Induced SETDB1 Overexpression Transcriptionally Inhibits HPGD in a β-Catenin-Dependent Manner and Promotes the Proliferation and Metastasis of Gastric Cancer.Sp1诱导的SETDB1过表达以β-连环蛋白依赖的方式转录抑制HPGD,并促进胃癌的增殖和转移。
J Gastric Cancer. 2022 Oct;22(4):319-338. doi: 10.5230/jgc.2022.22.e26.
5
Targeting Histone Epigenetic Modifications and DNA Damage Responses in Synthetic Lethality Strategies in Cancer?癌症合成致死策略中针对组蛋白表观遗传修饰和DNA损伤反应?
Cancers (Basel). 2022 Aug 22;14(16):4050. doi: 10.3390/cancers14164050.
6
SETDB1 acts as a topological accessory to Cohesin via an H3K9me3-independent, genomic shunt for regulating cell fates.SETDB1 通过一种不依赖 H3K9me3 的基因组分流,作为黏合蛋白的拓扑辅助因子,调节细胞命运。
Nucleic Acids Res. 2022 Jul 22;50(13):7326-7349. doi: 10.1093/nar/gkac531.
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Methyltransferases: Functions and Applications.甲基转移酶:功能与应用。
Chembiochem. 2022 Sep 16;23(18):e202200212. doi: 10.1002/cbic.202200212. Epub 2022 Jul 5.
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SETDB1 Restrains Endogenous Retrovirus Expression and Antitumor Immunity during Radiotherapy.SETDB1 抑制放射治疗过程中的内源性逆转录病毒表达和抗肿瘤免疫。
Cancer Res. 2022 Aug 3;82(15):2748-2760. doi: 10.1158/0008-5472.CAN-21-3523.
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Epigenetic basis of cancer drug resistance.癌症耐药性的表观遗传基础。
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