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利用组装理论和光谱学研究和量化分子复杂性。

Investigating and Quantifying Molecular Complexity Using Assembly Theory and Spectroscopy.

作者信息

Jirasek Michael, Sharma Abhishek, Bame Jessica R, Mehr S Hessam M, Bell Nicola, Marshall Stuart M, Mathis Cole, MacLeod Alasdair, Cooper Geoffrey J T, Swart Marcel, Mollfulleda Rosa, Cronin Leroy

机构信息

School of Chemistry, The University of Glasgow, University Avenue, Glasgow G12 8QQ, U.K.

University of Girona, Campus Montilivi (Ciencies), c/M.A. Capmany 69, 17003 Girona, Spain.

出版信息

ACS Cent Sci. 2024 Apr 18;10(5):1054-1064. doi: 10.1021/acscentsci.4c00120. eCollection 2024 May 22.

Abstract

Current approaches to evaluate molecular complexity use algorithmic complexity, rooted in computer science, and thus are not experimentally measurable. Directly evaluating molecular complexity could be used to study directed vs undirected processes in the creation of molecules, with potential applications in drug discovery, the origin of life, and artificial life. Assembly theory has been developed to quantify the complexity of a molecule by finding the shortest path to construct the molecule from building blocks, revealing its molecular assembly index (MA). In this study, we present an approach to rapidly infer the MA of molecules from spectroscopic measurements. We demonstrate that the MA can be experimentally measured by using three independent techniques: nuclear magnetic resonance (NMR), tandem mass spectrometry (MS/MS), and infrared spectroscopy (IR). By identifying and analyzing the number of absorbances in IR spectra, carbon resonances in NMR, or molecular fragments in tandem MS, the MA of an unknown molecule can be reliably estimated. This represents the first experimentally quantifiable approach to determining molecular assembly. This paves the way to use experimental techniques to explore the evolution of complex molecules as well as a unique marker of where an evolutionary process has been operating.

摘要

当前评估分子复杂性的方法使用的是源于计算机科学的算法复杂性,因此无法通过实验测量。直接评估分子复杂性可用于研究分子形成过程中的定向与非定向过程,在药物发现、生命起源和人工生命等方面具有潜在应用。组装理论已被开发出来,通过找到从构建模块构建分子的最短路径来量化分子的复杂性,从而揭示其分子组装指数(MA)。在本研究中,我们提出了一种从光谱测量中快速推断分子MA的方法。我们证明,可以通过使用三种独立技术来实验测量MA:核磁共振(NMR)、串联质谱(MS/MS)和红外光谱(IR)。通过识别和分析红外光谱中的吸收峰数量、核磁共振中的碳共振或串联质谱中的分子片段,可以可靠地估计未知分子的MA。这代表了第一种通过实验可量化的确定分子组装的方法。这为利用实验技术探索复杂分子的进化以及进化过程发生位置的独特标记铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f50d/11117308/9531d6599427/oc4c00120_0001.jpg

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