Research Unit Molecular Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany.
Institute of Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Cardiovasc Diabetol. 2024 May 29;23(1):181. doi: 10.1186/s12933-024-02274-3.
Atherosclerosis is the main cause of stroke and coronary heart disease (CHD), both leading mortality causes worldwide. Proteomics, as a high-throughput method, could provide helpful insights into the pathological mechanisms underlying atherosclerosis. In this study, we characterized the associations of plasma protein levels with CHD and with carotid intima-media thickness (CIMT), as a surrogate measure of atherosclerosis.
The discovery phase included 1000 participants from the KORA F4 study, whose plasma protein levels were quantified using the aptamer-based SOMAscan proteomics platform. We evaluated the associations of plasma protein levels with CHD using logistic regression, and with CIMT using linear regression. For both outcomes we applied two models: an age-sex adjusted model, and a model additionally adjusted for body mass index, smoking status, physical activity, diabetes status, hypertension status, low density lipoprotein, high density lipoprotein, and triglyceride levels (fully-adjusted model). The replication phase included a matched case-control sample from the independent KORA F3 study, using ELISA-based measurements of galectin-4. Pathway analysis was performed with nominally associated proteins (p-value < 0.05) from the fully-adjusted model.
In the KORA F4 sample, after Bonferroni correction, we found CHD to be associated with five proteins using the age-sex adjusted model: galectin-4 (LGALS4), renin (REN), cathepsin H (CTSH), and coagulation factors X and Xa (F10). The fully-adjusted model yielded only the positive association of galectin-4 (OR = 1.58, 95% CI = 1.30-1.93), which was successfully replicated in the KORA F3 sample (OR = 1.40, 95% CI = 1.09-1.88). For CIMT, we found four proteins to be associated using the age-sex adjusted model namely: cytoplasmic protein NCK1 (NCK1), insulin-like growth factor-binding protein 2 (IGFBP2), growth hormone receptor (GHR), and GDNF family receptor alpha-1 (GFRA1). After assessing the fully-adjusted model, only NCK1 remained significant (β = 0.017, p-value = 1.39e-06). Upstream regulators of galectin-4 and NCK1 identified from pathway analysis were predicted to be involved in inflammation pathways.
Our proteome-wide association study identified galectin-4 to be associated with CHD and NCK1 to be associated with CIMT. Inflammatory pathways underlying the identified associations highlight the importance of inflammation in the development and progression of CHD.
动脉粥样硬化是中风和冠心病(CHD)的主要病因,两者都是全球主要的死亡原因。蛋白质组学作为一种高通量方法,可以为动脉粥样硬化的病理机制提供有价值的见解。在这项研究中,我们通过基于适配体的 SOMAscan 蛋白质组学平台定量检测了血浆蛋白水平,以确定其与 CHD 和颈动脉内膜中层厚度(CIMT)的相关性,后者是动脉粥样硬化的替代指标。
在发现阶段,我们纳入了来自 KORA F4 研究的 1000 名参与者,使用基于适配体的 SOMAscan 蛋白质组学平台定量检测了他们的血浆蛋白水平。我们使用逻辑回归评估了血浆蛋白水平与 CHD 的相关性,使用线性回归评估了其与 CIMT 的相关性。对于这两个结果,我们都应用了两种模型:一种是年龄-性别调整模型,另一种是除了调整体重指数、吸烟状况、身体活动、糖尿病状况、高血压状况、低密度脂蛋白、高密度脂蛋白和甘油三酯水平之外的模型(完全调整模型)。在验证阶段,我们使用来自独立的 KORA F3 研究的匹配病例对照样本,通过 ELISA 检测半乳糖凝集素-4(Galectin-4)。对完全调整模型中具有显著关联的蛋白质(p 值 < 0.05)进行了途径分析。
在 KORA F4 样本中,经过 Bonferroni 校正,我们在年龄-性别调整模型中发现了五个与 CHD 相关的蛋白质:半乳糖凝集素-4(Galectin-4)、肾素(Renin)、组织蛋白酶 H(Cathepsin H)和凝血因子 X 和 Xa(F10)。完全调整模型仅发现半乳糖凝集素-4(Galectin-4)的阳性关联(OR = 1.58,95%CI = 1.30-1.93),这一关联在 KORA F3 样本中得到了成功复制(OR = 1.40,95%CI = 1.09-1.88)。对于 CIMT,我们在年龄-性别调整模型中发现了四个与 CIMT 相关的蛋白质:细胞质蛋白 NCK1(NCK1)、胰岛素样生长因子结合蛋白 2(IGFBP2)、生长激素受体(GHR)和 GDNF 家族受体 alpha-1(GFRA1)。在评估完全调整模型后,只有 NCK1 仍然具有显著意义(β = 0.017,p 值 = 1.39e-06)。途径分析中鉴定的半乳糖凝集素-4 和 NCK1 的上游调节因子被预测参与了炎症途径。
我们的全蛋白质组关联研究发现半乳糖凝集素-4 与 CHD 相关,NCK1 与 CIMT 相关。所确定的关联背后的炎症途径突出了炎症在 CHD 发展和进展中的重要性。