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改变的RecA多肽的分离及其与ATP和DNA的相互作用。

Isolation of altered recA polypeptides and interaction with ATP and DNA.

作者信息

Rusche J R, Konigsberg W, Howard-Flanders P

出版信息

J Biol Chem. 1985 Jan 25;260(2):949-55.

PMID:3881430
Abstract

In this paper we describe the partial proteolytic digestion of recA proteins from Escherichia coli and Proteus mirabilis and the production and isolation of truncated recA polypeptides. A proteolytic fragment of the P. mirabilis recA protein bound single-strand DNA and ATP normally but has altered duplex DNA binding properties. This protein was shown to initiate but not complete DNA strand transfer from a DNA duplex to a complementary single strand. The product of the E. coli recA1 allele bound but could not hydrolyze ATP and the protein bound single-strand but not double-strand DNA. This protein did not appear to initiate the transfer of a strand from a linear duplex to a single-strand circle and inhibited the wild-type recA protein from performing strand transfer. We report that recA protein binds linear duplex DNA in a manner that enhances the rate of ligation by T4 DNA ligase. When heterologous single-strand DNA was added in addition to the duplex DNA large stable aggregates of protein and DNA were formed that could easily be sedimented from solution.

摘要

在本文中,我们描述了来自大肠杆菌和奇异变形杆菌的RecA蛋白的部分蛋白酶解消化过程,以及截短的RecA多肽的产生和分离。奇异变形杆菌RecA蛋白的一个蛋白酶解片段能正常结合单链DNA和ATP,但其二聚体DNA结合特性发生了改变。该蛋白被证明能启动但不能完成从DNA双链到互补单链的DNA链转移。大肠杆菌recA1等位基因的产物能结合但不能水解ATP,且该蛋白能结合单链DNA但不能结合双链DNA。这种蛋白似乎不能启动从线性双链到单链环的链转移,并抑制野生型RecA蛋白进行链转移。我们报道,RecA蛋白以一种提高T4 DNA连接酶连接速率的方式结合线性双链DNA。当除双链DNA外还加入异源单链DNA时,会形成蛋白质和DNA的大的稳定聚集体,这些聚集体很容易从溶液中沉淀出来。

相似文献

1
Isolation of altered recA polypeptides and interaction with ATP and DNA.改变的RecA多肽的分离及其与ATP和DNA的相互作用。
J Biol Chem. 1985 Jan 25;260(2):949-55.
2
Homology-dependent changes in adenosine 5'-triphosphate hydrolysis during recA protein promoted DNA strand exchange: evidence for long paranemic complexes.RecA蛋白促进DNA链交换过程中依赖同源性的三磷酸腺苷水解变化:长平行配对复合物的证据
Biochemistry. 1987 Sep 8;26(18):5616-25. doi: 10.1021/bi00392a006.
3
Purification and properties of the recA protein of Proteus mirabilis. Comparison with Escherichia coli recA protein; specificity of interaction with single strand binding protein.奇异变形杆菌recA蛋白的纯化及特性。与大肠杆菌recA蛋白的比较;与单链结合蛋白相互作用的特异性。
J Biol Chem. 1983 Apr 10;258(7):4648-54.
4
RecA Protein from the extremely radioresistant bacterium Deinococcus radiodurans: expression, purification, and characterization.来自极端耐辐射细菌耐辐射球菌的RecA蛋白:表达、纯化及特性分析
J Bacteriol. 2002 Mar;184(6):1649-60. doi: 10.1128/JB.184.6.1649-1660.2002.
5
recA protein binding to the heteroduplex product of DNA strand exchange.RecA蛋白与DNA链交换的异源双链产物结合。
J Biol Chem. 1987 Jan 25;262(3):1337-43.
6
Effects of the Escherichia coli SSB protein on the binding of Escherichia coli RecA protein to single-stranded DNA. Demonstration of competitive binding and the lack of a specific protein-protein interaction.大肠杆菌单链结合蛋白(SSB)对大肠杆菌重组蛋白A(RecA)与单链DNA结合的影响。竞争性结合的证明及特定蛋白质-蛋白质相互作用的缺失。
J Mol Biol. 1987 Jan 5;193(1):81-95. doi: 10.1016/0022-2836(87)90629-2.
7
recA protein promoted DNA strand exchange.RecA蛋白促进DNA链交换。
J Biol Chem. 1983 May 25;258(10):6073-7.
8
DNA strand exchange promoted by RecA K72R. Two reaction phases with different Mg2+ requirements.由RecA K72R促进的DNA链交换。具有不同镁离子需求的两个反应阶段。
J Biol Chem. 1996 Mar 8;271(10):5712-24. doi: 10.1074/jbc.271.10.5712.
9
On the role of ATP hydrolysis in RecA protein-mediated DNA strand exchange. II. Four-strand exchanges.关于ATP水解在RecA蛋白介导的DNA链交换中的作用。II. 四链交换。
J Biol Chem. 1992 Aug 15;267(23):16444-9.
10
recA protein-promoted DNA strand exchange. Stable complexes of recA protein and single-stranded DNA formed in the presence of ATP and single-stranded DNA binding protein.RecA蛋白促进的DNA链交换。在ATP和单链DNA结合蛋白存在的情况下形成的RecA蛋白与单链DNA的稳定复合物。
J Biol Chem. 1982 Jul 25;257(14):8523-32.

引用本文的文献

1
Rad51 and RecA juxtapose dsDNA ends ready for DNA ligase-catalyzed end-joining under recombinase-suppressive conditions.在重组酶抑制条件下,Rad51和RecA将双链DNA末端并列,为DNA连接酶催化的末端连接做好准备。
Nucleic Acids Res. 2017 Jan 9;45(1):337-352. doi: 10.1093/nar/gkw998. Epub 2016 Oct 27.
2
Concentration-dependent organization of DNA by the dinoflagellate histone-like protein HCc3.由甲藻组蛋白样蛋白HCc3介导的DNA浓度依赖性组装
Nucleic Acids Res. 2007;35(8):2573-83. doi: 10.1093/nar/gkm165. Epub 2007 Apr 4.
3
Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA.
RecA和Rad51在DNA上形成的螺旋丝中的结构域结构与动力学。
Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8419-24. doi: 10.1073/pnas.111005398.
4
Identification and characterization of the RAD51 gene from the ciliate Tetrahymena thermophila.嗜热四膜虫RAD51基因的鉴定与特征分析。
Nucleic Acids Res. 1998 Jul 1;26(13):3165-72. doi: 10.1093/nar/26.13.3165.
5
Purification and characterization of the human Rad51 protein, an analogue of E. coli RecA.人类Rad51蛋白(大肠杆菌RecA的类似物)的纯化与特性分析
EMBO J. 1994 Dec 1;13(23):5764-71. doi: 10.1002/j.1460-2075.1994.tb06914.x.
6
Biochemistry of homologous recombination in Escherichia coli.大肠杆菌中同源重组的生物化学
Microbiol Rev. 1994 Sep;58(3):401-65. doi: 10.1128/mr.58.3.401-465.1994.
7
Hexamine cobalt chloride promotes intermolecular ligation of blunt end DNA fragments by T4 DNA ligase.六氨合氯化钴促进T4 DNA连接酶对平端DNA片段的分子间连接。
Nucleic Acids Res. 1985 Mar 25;13(6):1997-2008. doi: 10.1093/nar/13.6.1997.
8
Nucleotide binding by a 24-residue peptide from the RecA protein of Escherichia coli.来自大肠杆菌RecA蛋白的一个24个残基的肽段与核苷酸的结合。
Proc Natl Acad Sci U S A. 1986 Dec;83(24):9289-93. doi: 10.1073/pnas.83.24.9289.
9
Location of functional regions of the Escherichia coli RecA protein by DNA sequence analysis of RecA protease-constitutive mutants.通过RecA蛋白酶组成型突变体的DNA序列分析确定大肠杆菌RecA蛋白功能区域的位置
J Bacteriol. 1986 Nov;168(2):901-10. doi: 10.1128/jb.168.2.901-910.1986.
10
Ionic inhibition of formation of RecA nucleoprotein networks blocks homologous pairing.RecA核蛋白网络形成的离子抑制作用会阻断同源配对。
Proc Natl Acad Sci U S A. 1985 Sep;82(17):5646-50. doi: 10.1073/pnas.82.17.5646.