Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Department of Biochemistry-Genetic, School of Biological Sciences, Université Peleforo Gon Coulibaly, Korhogo, Côte d'Ivoire.
J Virol. 2024 Jul 23;98(7):e0066724. doi: 10.1128/jvi.00667-24. Epub 2024 Jun 3.
We report the discovery of a satellite-helper phage system with a novel type of dependence on a tail donor. The satellite podovirus Aci01-2-Phanie (short name Phanie) uses a phage phi29-like DNA replication and packaging mode. Its linear 11,885 bp dsDNA genome bears 171 bp inverted terminal repeats (ITR). Phanie is related to phage DU-PP-III from and to members of the from . Together, they form a new clade of phages with 27% to 30% identity over the whole genome. Detailed 3D protein structure prediction and mass spectrometry analyses demonstrate that Phanie encodes its capsid structural genes and genes necessary to form a short tail. However, our study reveals that Phanie virions are non-infectious unless they associate with the contractile tail of an unrelated phage, Aci01-1, to produce chimeric myoviruses. Following the coinfection of Phanie with myovirus Aci01-1, hybrid viral particles composed of Phanie capsids and Aci01-1 contractile tails are assembled together with Phanie and Aci01-1 particles.IMPORTANCEThere are few reported cases of satellite-helper phage interactions but many more may be yet undiscovered. Here we describe a new mode of satellite phage dependence on a helper phage. Phanie, like phage phi29, replicates its linear dsDNA by a protein primed-mechanism and protects it inside podovirus-like particles. However, these particles are defective, requiring the acquisition of the tail from a myovirus helper for production of infectious virions. The formation of chimeras between a phi29-like podovirus and a helper contractile tail reveals an unexpected association between very different bacterial viruses.
我们报告了一种具有新型尾部供体依赖性的卫星辅助噬菌体系统的发现。卫星 Podovirus Aci01-2-Phanie(简称 Phanie)使用类似噬菌体 phi29 的 DNA 复制和包装模式。其线性 11885 bp dsDNA 基因组带有 171 bp 反向末端重复序列(ITR)。Phanie 与来自 和 的噬菌体 DU-PP-III 有关,与 噬菌体有关。它们共同形成了一个新的噬菌体分支,整个基因组的同一性为 27%至 30%。详细的 3D 蛋白质结构预测和质谱分析表明,Phanie 编码其衣壳结构基因和形成短尾所需的基因。然而,我们的研究表明,除非 Phanie 病毒粒子与不相关的噬菌体 Aci01-1 的收缩尾巴相关联,否则它们是非感染性的,以产生嵌合肌病毒。在 Phanie 与肌病毒 Aci01-1 的共感染之后,由 Phanie 衣壳和 Aci01-1 收缩尾巴组成的杂交病毒粒子与 Phanie 和 Aci01-1 颗粒一起组装在一起。
重要性
卫星辅助噬菌体相互作用的报道很少,但可能还有更多尚未发现。在这里,我们描述了卫星噬菌体依赖辅助噬菌体的一种新模式。像噬菌体 phi29 一样,Phanie 通过蛋白引发机制复制其线性 dsDNA,并将其保护在 Podovirus 样颗粒内。然而,这些颗粒是有缺陷的,需要从肌病毒辅助噬菌体获得尾巴才能产生感染性病毒粒子。类似 phi29 的 Podovirus 与辅助收缩尾巴之间嵌合体的形成揭示了非常不同的细菌病毒之间的意外关联。