Department of Radiology, NYU Grossman School of Medicine, New York, New York.
Department of Neurosurgery, NYU Grossman School of Medicine, New York, New York.
Clin Cancer Res. 2024 Aug 15;30(16):3512-3519. doi: 10.1158/1078-0432.CCR-24-0311.
PURPOSE: DNA methylation profiling stratifies isocitrate dehydrogenase (IDH)-mutant astrocytomas into methylation low- and high-grade groups. We investigated the utility of the T2-fluid-attenuated inversion recovery (T2-FLAIR) mismatch sign for predicting DNA methylation grade and cyclin-dependent kinase inhibitor 2A/B (CDKN2A/B) homozygous deletion, a molecular biomarker for grade 4 IDH-mutant astrocytomas, according to the 2021 World Health Organization classification. EXPERIMENTAL DESIGN: Preoperative MRI scans of IDH-mutant astrocytomas subclassified by DNA methylation profiling (n = 71) were independently evaluated by two radiologists for the T2-FLAIR mismatch sign. The diagnostic utility of T2-FLAIR mismatch in predicting methylation grade, CDKN2A/B status, copy number variation, and survival was analyzed. RESULTS: The T2-FLAIR mismatch sign was present in 21 of 45 (46.7%) methylation low-grade and 1 of 26 (3.9%) methylation high-grade cases (P < 0.001), resulting in 96.2% specificity, 95.5% positive predictive value, and 51.0% negative predictive value for predicting low methylation grade. The T2-FLAIR mismatch sign was also significantly associated with intact CDKN2A/B status (P = 0.028) with 87.5% specificity, 86.4% positive predictive value, and 42.9% negative predictive value. Overall multivariable Cox analysis showed that retained CDKN2A/B status remained significant for progression-free survival (P = 0.01). Multivariable Cox analysis of the histologic grade 3 subset, which was nearly evenly divided by CDKN2A/B status, copy number variation, and methylation grade, showed trends toward significance for DNA methylation grade with overall survival (P = 0.045) and CDKN2A/B status with progression-free survival (P = 0.052). CONCLUSIONS: The T2-FLAIR mismatch sign is highly specific for low methylation grade and intact CDKN2A/B in IDH-mutant astrocytomas.
目的:DNA 甲基化分析将异柠檬酸脱氢酶(IDH)突变型星形细胞瘤分为甲基化低级别和高级别组。我们根据 2021 年世界卫生组织分类,研究了 T2 液体衰减反转恢复(T2-FLAIR)失配信号在预测 DNA 甲基化级别和细胞周期蛋白依赖性激酶抑制剂 2A/B(CDKN2A/B)纯合缺失(IDH 突变型星形细胞瘤 4 级的分子生物标志物)方面的应用。
实验设计:对 DNA 甲基化谱分类的 IDH 突变型星形细胞瘤的术前 MRI 扫描(n=71)由两名放射科医生独立评估 T2-FLAIR 失配信号。分析 T2-FLAIR 失配在预测甲基化级别、CDKN2A/B 状态、拷贝数变异和生存方面的诊断效用。
结果:45 例甲基化低级别病例中有 21 例(46.7%)和 26 例甲基化高级别病例中有 1 例(3.9%)存在 T2-FLAIR 失配信号(P<0.001),特异性为 96.2%,阳性预测值为 95.5%,阴性预测值为 51.0%,用于预测低甲基化级别。T2-FLAIR 失配信号也与完整的 CDKN2A/B 状态显著相关(P=0.028),特异性为 87.5%,阳性预测值为 86.4%,阴性预测值为 42.9%。总体多变量 Cox 分析显示,保留的 CDKN2A/B 状态与无进展生存率相关(P=0.01)。对 CDKN2A/B 状态、拷贝数变异和甲基化级别几乎平分的组织学 3 级亚组进行多变量 Cox 分析,结果显示 DNA 甲基化级别与总生存率相关(P=0.045),CDKN2A/B 状态与无进展生存率相关(P=0.052)有趋势。
结论:T2-FLAIR 失配信号对 IDH 突变型星形细胞瘤的低甲基化级别和完整的 CDKN2A/B 具有高度特异性。
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