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欧洲心脏病学会指南和全外显子测序对遗传性心脏疾病基因检测的影响。

The impact of the European Society of Cardiology guidelines and whole exome sequencing on genetic testing in hereditary cardiac diseases.

机构信息

Department of Medicine (DMED), University of Udine, Udine, Italy.

Institute of Medical Genetics, Azienda Sanitaria Universitaria Friuli Centrale (ASUFC), Udine, Italy.

出版信息

Clin Genet. 2024 Oct;106(4):394-402. doi: 10.1111/cge.14569. Epub 2024 Jun 4.

Abstract

In the last decade, an incredible improvement has been made in elucidating the genetic bases of cardiomyopathies. Here we report the impact of either the European Society of Cardiology (ESC) guidelines or the use of whole exome sequencing (WES) in terms of a number of variants of uncertain significance (VUS) and missed diagnoses in a series of 260 patients affected by inherited cardiac disorders. Samples were analyzed using a targeted gene panel of 128 cardiac-related genes and/or WES in a subset of patients, with a three-tier approach. Analyzing (i) only a subset of genes related to the clinical presentation, strictly following the ESC guidelines, 20.77% positive test were assessed. The incremental diagnostic rate for (ii) the whole gene panel, and (iii) the WES was 4.71% and 11.67%, respectively. The diverse analytical approaches increased the number of VUSs and incidental findings. Indeed, the use of WES highlights that there is a small percentage of syndromic conditions that standard analysis would not have detected. Moreover, the use of targeted sequencing coupled with "narrow" analytical approach prevents the detection of variants in actionable genes that could allow for preventive treatment. Our data suggest that genetic testing might aid clinicians in the diagnosis of inheritable cardiac disorders.

摘要

在过去的十年中,人们在阐明心肌病的遗传基础方面取得了令人难以置信的进展。在这里,我们报告了在一系列 260 名遗传性心脏疾病患者中,无论是采用欧洲心脏病学会 (ESC) 指南还是全外显子组测序 (WES),都会对大量意义未明的变异 (VUS) 和漏诊产生影响。使用靶向包含 128 个心脏相关基因的基因 panel 和/或 WES 对患者的亚组进行分析,采用三层分析方法。仅分析(i)与临床表现相关的部分基因,并严格遵循 ESC 指南,评估阳性测试的比例为 20.77%。(ii)整个基因 panel 和(iii)WES 的增量诊断率分别为 4.71%和 11.67%。不同的分析方法增加了 VUS 和偶然发现的数量。实际上,WES 的使用表明,标准分析无法检测到一小部分综合征条件。此外,靶向测序与“狭义”分析方法相结合,可防止检测到可采取行动的基因中的变异,而这些变异可进行预防性治疗。我们的数据表明,基因检测可能有助于临床医生诊断遗传性心脏疾病。

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