• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

向前循环:探索R环加工及治疗潜力。

Looping forward: exploring R-loop processing and therapeutic potential.

作者信息

Stratigi Kalliopi, Siametis Athanasios, Garinis George A

机构信息

Institute of Molecular Biology and Biotechnology (IMBB), Foundation for Research and Technology-Hellas, Heraklion, Crete, Greece.

Department of Biology, University of Crete, Heraklion, Crete, Greece.

出版信息

FEBS Lett. 2025 Jan;599(2):244-266. doi: 10.1002/1873-3468.14947. Epub 2024 Jun 6.

DOI:10.1002/1873-3468.14947
PMID:38844597
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11771710/
Abstract

Recently, there has been increasing interest in the complex relationship between transcription and genome stability, with specific attention directed toward the physiological significance of molecular structures known as R-loops. These structures arise when an RNA strand invades into the DNA duplex, and their formation is involved in a wide range of regulatory functions affecting gene expression, DNA repair processes or cell homeostasis. The persistent presence of R-loops, if not effectively removed, contributes to genome instability, underscoring the significance of the factors responsible for their resolution and modification. In this review, we provide a comprehensive overview of how R-loop processing can drive either a beneficial or a harmful outcome. Additionally, we explore the potential for manipulating such structures to devise rationalized therapeutic strategies targeting the aberrant accumulation of R-loops.

摘要

最近,转录与基因组稳定性之间的复杂关系引发了越来越多的关注,其中特别关注了一种称为R环的分子结构的生理意义。当RNA链侵入DNA双链体时,这些结构就会出现,其形成涉及影响基因表达、DNA修复过程或细胞内稳态的广泛调节功能。如果不能有效去除,R环的持续存在会导致基因组不稳定,这突出了负责其分解和修饰的因素的重要性。在这篇综述中,我们全面概述了R环加工如何产生有益或有害的结果。此外,我们探讨了操纵此类结构以设计针对R环异常积累的合理治疗策略的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/c81f061ab7fc/FEB2-599-244-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/8201f913342a/FEB2-599-244-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/f19d646db49c/FEB2-599-244-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/c81f061ab7fc/FEB2-599-244-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/8201f913342a/FEB2-599-244-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/f19d646db49c/FEB2-599-244-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99ff/11771710/c81f061ab7fc/FEB2-599-244-g002.jpg

相似文献

1
Looping forward: exploring R-loop processing and therapeutic potential.向前循环:探索R环加工及治疗潜力。
FEBS Lett. 2025 Jan;599(2):244-266. doi: 10.1002/1873-3468.14947. Epub 2024 Jun 6.
2
Regulatory R-loops as facilitators of gene expression and genome stability.调控性 R 环作为基因表达和基因组稳定性的促进因子。
Nat Rev Mol Cell Biol. 2020 Mar;21(3):167-178. doi: 10.1038/s41580-019-0206-3. Epub 2020 Jan 31.
3
R-loop generation during transcription: Formation, processing and cellular outcomes.转录过程中 R 环的生成:形成、加工和细胞后果。
DNA Repair (Amst). 2018 Nov;71:69-81. doi: 10.1016/j.dnarep.2018.08.009. Epub 2018 Aug 25.
4
Intertwining roles of R-loops and G-quadruplexes in DNA repair, transcription and genome organization.R 环和 G-四联体在 DNA 修复、转录和基因组组织中的交织作用。
Nat Cell Biol. 2024 Jul;26(7):1025-1036. doi: 10.1038/s41556-024-01437-4. Epub 2024 Jun 24.
5
Sources, resolution and physiological relevance of R-loops and RNA-DNA hybrids.R 环和 RNA-DNA 杂交的来源、分辨率和生理相关性。
Nat Rev Mol Cell Biol. 2022 Aug;23(8):521-540. doi: 10.1038/s41580-022-00474-x. Epub 2022 Apr 22.
6
R Loops: From Physiological to Pathological Roles.R 环:从生理作用到病理作用。
Cell. 2019 Oct 17;179(3):604-618. doi: 10.1016/j.cell.2019.08.055. Epub 2019 Oct 10.
7
PARP1 associates with R-loops to promote their resolution and genome stability.PARP1 与 R 环结合以促进其解决和基因组稳定性。
Nucleic Acids Res. 2023 Mar 21;51(5):2215-2237. doi: 10.1093/nar/gkad066.
8
R-Loops as Cellular Regulators and Genomic Threats.R-Loops 作为细胞调控因子和基因组威胁
Mol Cell. 2019 Feb 7;73(3):398-411. doi: 10.1016/j.molcel.2019.01.024.
9
The hidden weavers: A review of DNA/RNA R-loops in stem cell biology and therapeutic potential.隐藏的编织者:干细胞生物学中DNA/RNA R环及其治疗潜力综述
Int J Biol Macromol. 2025 Mar;297:139895. doi: 10.1016/j.ijbiomac.2025.139895. Epub 2025 Jan 14.
10
Walking a tightrope: The complex balancing act of R-loops in genome stability.走钢丝:R 环在基因组稳定性中的复杂平衡作用。
Mol Cell. 2022 Jun 16;82(12):2267-2297. doi: 10.1016/j.molcel.2022.04.014. Epub 2022 May 3.

引用本文的文献

1
Transcription-Coupled Repair and R-Loop Crosstalk in Genome Stability.转录偶联修复与基因组稳定性中的R环串扰
Int J Mol Sci. 2025 Apr 16;26(8):3744. doi: 10.3390/ijms26083744.
2
SRSF2 overexpression induces transcription-/replication-dependent DNA double-strand breaks and interferes with DNA repair pathways to promote lung tumor progression.SRSF2过表达诱导转录/复制依赖性DNA双链断裂并干扰DNA修复途径,以促进肺癌进展。
NAR Cancer. 2025 Apr 2;7(2):zcaf011. doi: 10.1093/narcan/zcaf011. eCollection 2025 Jun.
3
Identification and Construction of a R-loop Mediated Diagnostic Model and Associated Immune Microenvironment of COPD through Machine Learning and Single-Cell Transcriptomics.

本文引用的文献

1
Transcription stress at telomeres leads to cytosolic DNA release and paracrine senescence.端粒处的转录应激会导致细胞质 DNA 释放和旁分泌衰老。
Nat Commun. 2024 May 14;15(1):4061. doi: 10.1038/s41467-024-48443-6.
2
XPF interacts with TOP2B for R-loop processing and DNA looping on actively transcribed genes.XPF 与 TOP2B 相互作用,用于 R 环处理和活跃转录基因上的 DNA 环化。
Sci Adv. 2023 Nov 10;9(45):eadi2095. doi: 10.1126/sciadv.adi2095. Epub 2023 Nov 8.
3
R-Loops in Genome Instability and Cancer.基因组不稳定与癌症中的R环
通过机器学习和单细胞转录组学鉴定和构建慢性阻塞性肺疾病的R环介导诊断模型及相关免疫微环境
Inflammation. 2025 Jan 11. doi: 10.1007/s10753-024-02232-x.
Cancers (Basel). 2023 Oct 14;15(20):4986. doi: 10.3390/cancers15204986.
4
Chromatin compartmentalization regulates the response to DNA damage.染色质区室化调节对 DNA 损伤的反应。
Nature. 2023 Nov;623(7985):183-192. doi: 10.1038/s41586-023-06635-y. Epub 2023 Oct 18.
5
'From R-lupus to cancer': Reviewing the role of R-loops in innate immune responses.'从 R 狼疮到癌症': 综述 R 环在先天免疫反应中的作用。
DNA Repair (Amst). 2023 Nov;131:103581. doi: 10.1016/j.dnarep.2023.103581. Epub 2023 Oct 6.
6
DICER ribonuclease removes harmful R-loops.DICER 核糖核酸酶可清除有害 R 环。
Mol Cell. 2023 Oct 19;83(20):3707-3719.e5. doi: 10.1016/j.molcel.2023.09.021. Epub 2023 Oct 11.
7
Function of mC RNA methyltransferase NOP2 in high-grade serous ovarian cancer.mC RNA 甲基转移酶 NOP2 在高级别浆液性卵巢癌中的作用。
Cancer Biol Ther. 2023 Dec 31;24(1):2263921. doi: 10.1080/15384047.2023.2263921. Epub 2023 Oct 6.
8
Helicases in R-loop Formation and Resolution.解旋酶在 R 环形成和解析中的作用。
J Biol Chem. 2023 Nov;299(11):105307. doi: 10.1016/j.jbc.2023.105307. Epub 2023 Sep 29.
9
The RNA m5C modification in R-loops as an off switch of Alt-NHEJ.R 环中 RNA m5C 修饰作为替代 NHEJ 的关闭开关。
Nat Commun. 2023 Sep 30;14(1):6114. doi: 10.1038/s41467-023-41790-w.
10
Promoter R-Loops Recruit U2AF1 to Modulate Its Phase Separation and RNA Splicing.启动子 R 环招募 U2AF1 来调节其液-液相分离和 RNA 剪接。
J Am Chem Soc. 2023 Oct 4;145(39):21646-21660. doi: 10.1021/jacs.3c08204. Epub 2023 Sep 21.