• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

胞外电子摄取途径中铁氧化菌 ES-1 细胞色素 MtoD 的共振分配。

Resonance assignments of cytochrome MtoD from the extracellular electron uptake pathway of sideroxydans lithotrophicus ES-1.

机构信息

Instituto de Tecnologia Química e Biológica António Xavier (ITQB-NOVA), Universidade Nova de Lisboa, Av. da República (EAN), Oeiras, 2780-157, Portugal.

Department of Chemistry, Magnetic Resonance Center (CERM), University of Florence, Via L. Sacconi 6, Sesto Fiorentino, 50019, Italy.

出版信息

Biomol NMR Assign. 2024 Dec;18(2):139-146. doi: 10.1007/s12104-024-10180-8. Epub 2024 Jun 7.

DOI:10.1007/s12104-024-10180-8
PMID:38844727
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11511738/
Abstract

The contribution of Fe(II)-oxidizing bacteria to iron cycling in freshwater, groundwater, and marine environments has been widely recognized in recent years. These organisms perform extracellular electron transfer (EET), which constitutes the foundations of bioelectrochemical systems for the production of biofuels and bioenergy. It was proposed that the Gram-negative bacterium Sideroxydans lithotrophicus ES-1 oxidizes soluble ferrous Fe(II) at the surface of the cell and performs EET through the Mto redox pathway. This pathway is composed by the periplasmic monoheme cytochrome MtoD that is proposed to bridge electron transfer between the cell exterior and the cytoplasm. This makes its functional and structural characterization, as well as evaluating the interaction process with its physiological partners, essential for understanding the mechanisms underlying EET. Here, we report the complete assignment of the heme proton and carbon signals together with a near-complete assignment of H, C and N backbone and side chain resonances for the reduced, diamagnetic form of the protein. These data pave the way to identify and structurally map the molecular interaction regions between the cytochrome MtoD and its physiological redox partners, to explore the EET processes of S. lithotrophicus ES-1.

摘要

近年来,人们广泛认识到亚铁氧化菌在淡水、地下水和海洋环境中铁循环中的作用。这些生物体进行细胞外电子转移(EET),这构成了生物燃料和生物能源生产的生物电化学系统的基础。有人提出革兰氏阴性细菌 Sideroxydans lithotrophicus ES-1 在细胞表面氧化可溶性二价铁 Fe(II),并通过 Mto 氧化还原途径进行 EET。该途径由周质单血红素细胞色素 MtoD 组成,据推测该细胞色素在细胞外和细胞质之间桥接电子转移。因此,对其功能和结构进行表征,以及评估与生理伙伴的相互作用过程,对于理解 EET 机制至关重要。在这里,我们报告了血红素质子和碳信号的完整分配,以及还原的、抗磁性形式蛋白质的 H、C 和 N 骨架和侧链共振的近乎完整分配。这些数据为鉴定和结构映射细胞色素 MtoD 与其生理氧化还原伙伴之间的分子相互作用区域铺平了道路,以探索 S. lithotrophicus ES-1 的 EET 过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/fec83b815b67/12104_2024_10180_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/c33778d711c2/12104_2024_10180_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/e7521878eb03/12104_2024_10180_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/ee23ef7df394/12104_2024_10180_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/fec83b815b67/12104_2024_10180_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/c33778d711c2/12104_2024_10180_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/e7521878eb03/12104_2024_10180_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/ee23ef7df394/12104_2024_10180_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9537/11511738/fec83b815b67/12104_2024_10180_Fig4_HTML.jpg

相似文献

1
Resonance assignments of cytochrome MtoD from the extracellular electron uptake pathway of sideroxydans lithotrophicus ES-1.胞外电子摄取途径中铁氧化菌 ES-1 细胞色素 MtoD 的共振分配。
Biomol NMR Assign. 2024 Dec;18(2):139-146. doi: 10.1007/s12104-024-10180-8. Epub 2024 Jun 7.
2
An organotrophic reveals potential iron oxidation marker genes.一种有机营养型生物揭示了潜在的铁氧化标记基因。
bioRxiv. 2025 Feb 28:2025.02.27.639646. doi: 10.1101/2025.02.27.639646.
3
Identification of factors limiting the efficiency of transplanting extracellular electron transfer chains in .确定限制在……中移植细胞外电子传递链效率的因素。
Appl Environ Microbiol. 2025 Jun 18;91(6):e0068525. doi: 10.1128/aem.00685-25. Epub 2025 May 13.
4
Crucial roles of intracellular cyclic di-GMP in impacting the genes important for extracellular electron transfer by .细胞内环状二鸟苷酸在影响由……进行细胞外电子转移的重要基因方面的关键作用 。 需注意,原文中“by.”后面似乎缺失了具体内容。
Appl Environ Microbiol. 2025 Jul 23;91(7):e0072725. doi: 10.1128/aem.00727-25. Epub 2025 Jun 4.
5
Evidence for Quinol Oxidation Activity of ImoA, a Novel NapC/NirT Family Protein from the Neutrophilic Fe(II)-Oxidizing Bacterium Sideroxydans lithotrophicus ES-1.证据表明,来自嗜中性 Fe(II)氧化细菌 Sideroxydans lithotrophicus ES-1 的新型 NapC/NirT 家族蛋白 ImoA 具有喹喔啉氧化活性。
mBio. 2022 Oct 26;13(5):e0215022. doi: 10.1128/mbio.02150-22. Epub 2022 Sep 15.
6
The TonB-Dependent Transport System Facilitates the Uptake of Inorganic Metal Mediators in Pseudomonas putida KT2440 in a Bioelectrochemical System.在生物电化学系统中,TonB依赖性转运系统促进恶臭假单胞菌KT2440对无机金属介质的摄取。
Microb Biotechnol. 2025 Aug;18(8):e70206. doi: 10.1111/1751-7915.70206.
7
Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth.嗜铁氧化亚铁杆菌中MtoD的特性:一种用于化能自养生长的细胞色素c电子穿梭体。
Front Microbiol. 2015 Apr 28;6:332. doi: 10.3389/fmicb.2015.00332. eCollection 2015.
8
Short-Term Memory Impairment短期记忆障碍
9
Independently evolved extracellular electron transfer pathways in ecologically diverse Desulfobacterota.生态多样的脱硫杆菌门中独立进化的细胞外电子传递途径。
ISME J. 2025 Jan 2;19(1). doi: 10.1093/ismejo/wraf097.
10
Adsorption and electron transfer of metal-reducing decaheme cytochrome protein MtrF on iron oxide nanoparticle surfaces.金属还原十聚细胞色素蛋白MtrF在氧化铁纳米颗粒表面的吸附与电子转移
Nanoscale. 2025 Jul 16;17(28):16737-16747. doi: 10.1039/d5nr01891a.

本文引用的文献

1
Reconstructing electron transfer components from an Fe(II) oxidizing bacterium.从一株 Fe(II)氧化细菌中重建电子转移组分。
Microbiology (Reading). 2022 Sep;168(9). doi: 10.1099/mic.0.001240.
2
Evidence for Quinol Oxidation Activity of ImoA, a Novel NapC/NirT Family Protein from the Neutrophilic Fe(II)-Oxidizing Bacterium Sideroxydans lithotrophicus ES-1.证据表明,来自嗜中性 Fe(II)氧化细菌 Sideroxydans lithotrophicus ES-1 的新型 NapC/NirT 家族蛋白 ImoA 具有喹喔啉氧化活性。
mBio. 2022 Oct 26;13(5):e0215022. doi: 10.1128/mbio.02150-22. Epub 2022 Sep 15.
3
NMR of paramagnetic metalloproteins in solution: Ubi venire, quo vadis?
溶液中顺磁金属蛋白的 NMR:何去何从?
J Inorg Biochem. 2022 Sep;234:111871. doi: 10.1016/j.jinorgbio.2022.111871. Epub 2022 May 23.
4
Elucidation of complex respiratory chains: a straightforward strategy to monitor electron transfer between cytochromes.复杂呼吸链的解析:一种监测细胞色素之间电子转移的直接策略。
Metallomics. 2022 Apr 18;14(4). doi: 10.1093/mtomcs/mfac012.
5
Unraveling Fe(II)-Oxidizing Mechanisms in a Facultative Fe(II) Oxidizer, Sideroxydans lithotrophicus Strain ES-1, via Culturing, Transcriptomics, and Reverse Transcription-Quantitative PCR.通过培养、转录组学和反转录定量 PCR 揭示兼性 Fe(II)氧化剂 Sideroxydans lithotrophicus 菌株 ES-1 中的 Fe(II)氧化机制
Appl Environ Microbiol. 2022 Jan 25;88(2):e0159521. doi: 10.1128/AEM.01595-21. Epub 2021 Nov 17.
6
Extracellular electron uptake by autotrophic microbes: physiological, ecological, and evolutionary implications.自养微生物的胞外电子摄取:生理、生态和进化意义。
J Ind Microbiol Biotechnol. 2020 Oct;47(9-10):863-876. doi: 10.1007/s10295-020-02309-0. Epub 2020 Sep 15.
7
Microbial electron uptake in microbial electrosynthesis: a mini-review.微生物电合成中的微生物电子摄取:一篇小综述。
J Ind Microbiol Biotechnol. 2019 Oct;46(9-10):1419-1426. doi: 10.1007/s10295-019-02166-6. Epub 2019 Mar 28.
8
Genomic Analyses of the Quinol Oxidases and/or Quinone Reductases Involved in Bacterial Extracellular Electron Transfer.参与细菌细胞外电子转移的喹啉氧化酶和/或醌还原酶的基因组分析
Front Microbiol. 2018 Dec 10;9:3029. doi: 10.3389/fmicb.2018.03029. eCollection 2018.
9
Comparative Genomic Analysis of Neutrophilic Iron(II) Oxidizer Genomes for Candidate Genes in Extracellular Electron Transfer.嗜中性亚铁氧化菌基因组中细胞外电子转移候选基因的比较基因组分析
Front Microbiol. 2017 Aug 21;8:1584. doi: 10.3389/fmicb.2017.01584. eCollection 2017.
10
Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth.嗜铁氧化亚铁杆菌中MtoD的特性:一种用于化能自养生长的细胞色素c电子穿梭体。
Front Microbiol. 2015 Apr 28;6:332. doi: 10.3389/fmicb.2015.00332. eCollection 2015.