• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种高效的吡咯赖氨酰-tRNA 合成酶,用于经济高效地生产含 MeHis 的酶。

An efficient pyrrolysyl-tRNA synthetase for economical production of MeHis-containing enzymes.

机构信息

Manchester Institute of Biotechnology, School of Chemistry, The University of Manchester, Manchester, UK.

出版信息

Faraday Discuss. 2024 Sep 11;252(0):295-305. doi: 10.1039/d4fd00019f.

DOI:10.1039/d4fd00019f
PMID:38847587
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11389853/
Abstract

Genetic code expansion has emerged as a powerful tool in enzyme design and engineering, providing new insights into sophisticated catalytic mechanisms and enabling the development of enzymes with new catalytic functions. In this regard, the non-canonical histidine analogue -methylhistidine (MeHis) has proven especially versatile due to its ability to serve as a metal coordinating ligand or a catalytic nucleophile with a similar mode of reactivity to small molecule catalysts such as 4-dimethylaminopyridine (DMAP). Here we report the development of a highly efficient aminoacyl tRNA synthetase (G1PylRS) for encoding MeHis into proteins, by transplanting five known active site mutations from (PylRS) into the single domain PylRS from ISO4-G1. In contrast to the high concentrations of MeHis (5-10 mM) needed with the system, G1PylRS can operate efficiently using MeHis concentrations of ∼0.1 mM, allowing more economical production of a range of MeHis-containing enzymes in high titres. Interestingly G1PylRS is also a 'polyspecific' aminoacyl tRNA synthetase (aaRS), enabling incorporation of five different non-canonical amino acids (ncAAs) including 3-pyridylalanine and 2-fluorophenylalanine. This study provides an important step towards scalable production of engineered enzymes that contain non-canonical amino acids such as MeHis as key catalytic elements.

摘要

遗传密码扩展已成为酶设计和工程的强大工具,为复杂的催化机制提供了新的见解,并能够开发具有新催化功能的酶。在这方面,非典型组氨酸类似物 -甲基组氨酸(MeHis)因其能够作为金属配位配体或催化亲核试剂发挥作用而具有多功能性,其反应模式类似于小分子催化剂,如 4-二甲氨基吡啶(DMAP)。在这里,我们通过将五个已知的活性位点突变从 (PylRS)移植到来自 ISO4-G1 的单结构域 PylRS 中,开发了一种高效的用于将 MeHis 编码到蛋白质中的氨酰 tRNA 合成酶(G1PylRS)。与 系统中需要高浓度 MeHis(5-10 mM)相比,G1PylRS 可以在约 0.1 mM 的 MeHis 浓度下有效运行,从而可以更经济地生产一系列高浓度的含有 MeHis 的酶。有趣的是,G1PylRS 也是一种“多特异性”氨酰 tRNA 合成酶(aaRS),能够掺入包括 3-吡啶基丙氨酸和 2-氟苯丙氨酸在内的五种不同的非典型氨基酸(ncAAs)。这项研究为可扩展生产含有非典型氨基酸(如 MeHis)作为关键催化元件的工程酶提供了重要步骤。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/6c875695abd9/d4fd00019f-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/0a320a43ec48/d4fd00019f-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/039c5d5c1dfa/d4fd00019f-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/d046f8eb254f/d4fd00019f-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/7cd4eb06595b/d4fd00019f-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/6c875695abd9/d4fd00019f-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/0a320a43ec48/d4fd00019f-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/039c5d5c1dfa/d4fd00019f-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/d046f8eb254f/d4fd00019f-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/7cd4eb06595b/d4fd00019f-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5564/11389853/6c875695abd9/d4fd00019f-f5.jpg

相似文献

1
An efficient pyrrolysyl-tRNA synthetase for economical production of MeHis-containing enzymes.一种高效的吡咯赖氨酰-tRNA 合成酶,用于经济高效地生产含 MeHis 的酶。
Faraday Discuss. 2024 Sep 11;252(0):295-305. doi: 10.1039/d4fd00019f.
2
Engineering mutually orthogonal PylRS/tRNA pairs for dual encoding of functional histidine analogues.工程化相互正交的 PylRS/tRNA 对,用于双重编码功能性组氨酸类似物。
Protein Sci. 2023 May;32(5):e4640. doi: 10.1002/pro.4640.
3
Crystal Structure of Pyrrolysyl-tRNA Synthetase from a Methanogenic Archaeon ISO4-G1 and Its Structure-Based Engineering for Highly-Productive Cell-Free Genetic Code Expansion with Non-Canonical Amino Acids.甲烷古菌 ISO4-G1 的吡咯赖氨酰-tRNA 合成酶的晶体结构及其基于结构的工程改造,用于高效的非天然氨基酸扩展细胞游离遗传密码子。
Int J Mol Sci. 2023 Mar 26;24(7):6256. doi: 10.3390/ijms24076256.
4
An Evolved Methanomethylophilus alvus Pyrrolysyl-tRNA Synthetase/tRNA Pair Is Highly Active and Orthogonal in Mammalian Cells.进化的 Methanomethylophilus alvus 吡咯赖氨酸-tRNA 合成酶/tRNA 对在哺乳动物细胞中具有高度活性和正交性。
Biochemistry. 2019 Feb 5;58(5):387-390. doi: 10.1021/acs.biochem.8b00808. Epub 2018 Sep 27.
5
Methanomethylophilus alvus Mx1201 Provides Basis for Mutual Orthogonal Pyrrolysyl tRNA/Aminoacyl-tRNA Synthetase Pairs in Mammalian Cells.瘤胃甲烷八叠球菌 Mx1201 为哺乳动物细胞中相互正交的吡咯赖氨酸 tRNA/氨酰-tRNA 合成酶对提供基础。
ACS Chem Biol. 2018 Nov 16;13(11):3087-3096. doi: 10.1021/acschembio.8b00571. Epub 2018 Oct 12.
6
Generating Efficient Pyrrolysyl-tRNA Synthetases for Structurally Diverse Non-Canonical Amino Acids.生成高效的吡咯赖氨酰-tRNA 合成酶用于结构多样的非标准氨基酸。
ACS Chem Biol. 2022 Dec 16;17(12):3458-3469. doi: 10.1021/acschembio.2c00639. Epub 2022 Nov 16.
7
tRNA shape is an identity element for an archaeal pyrrolysyl-tRNA synthetase from the human gut.tRNA 形状是来自人类肠道的古菌吡咯赖氨酰-tRNA 合成酶的身份要素。
Nucleic Acids Res. 2024 Jan 25;52(2):513-524. doi: 10.1093/nar/gkad1188.
8
Engineering a Polyspecific Pyrrolysyl-tRNA Synthetase by a High Throughput FACS Screen.高通量 FACS 筛选工程化多特异性吡咯赖氨酰-tRNA 合成酶。
Sci Rep. 2019 Aug 19;9(1):11971. doi: 10.1038/s41598-019-48357-0.
9
Mutually orthogonal pyrrolysyl-tRNA synthetase/tRNA pairs.互斥的吡咯赖氨酰-tRNA 合成酶/tRNA 对。
Nat Chem. 2018 Aug;10(8):831-837. doi: 10.1038/s41557-018-0052-5. Epub 2018 May 28.
10
Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.工程化吡咯赖氨酰-tRNA 合成酶对大体积赖氨酸衍生物进行遗传密码扩展的结构基础。
Cell Chem Biol. 2019 Jul 18;26(7):936-949.e13. doi: 10.1016/j.chembiol.2019.03.008. Epub 2019 Apr 25.

引用本文的文献

1
Evolution of Pyrrolysyl-tRNA Synthetase: From Methanogenesis to Genetic Code Expansion.吡咯赖氨酰-tRNA 合成酶的进化:从产甲烷作用到遗传密码扩展。
Chem Rev. 2024 Aug 28;124(16):9580-9608. doi: 10.1021/acs.chemrev.4c00031. Epub 2024 Jul 2.

本文引用的文献

1
A non-canonical nucleophile unlocks a new mechanistic pathway in a designed enzyme.一种非经典亲核试剂在设计酶中解锁了一条新的机制途径。
Nat Commun. 2024 Mar 4;15(1):1956. doi: 10.1038/s41467-024-46123-z.
2
Debugging and consolidating multiple synthetic chromosomes reveals combinatorial genetic interactions.调试和整合多个合成染色体揭示了组合遗传相互作用。
Cell. 2023 Nov 22;186(24):5220-5236.e16. doi: 10.1016/j.cell.2023.09.025. Epub 2023 Nov 8.
3
Engineering mutually orthogonal PylRS/tRNA pairs for dual encoding of functional histidine analogues.
工程化相互正交的 PylRS/tRNA 对,用于双重编码功能性组氨酸类似物。
Protein Sci. 2023 May;32(5):e4640. doi: 10.1002/pro.4640.
4
Crystal Structure of Pyrrolysyl-tRNA Synthetase from a Methanogenic Archaeon ISO4-G1 and Its Structure-Based Engineering for Highly-Productive Cell-Free Genetic Code Expansion with Non-Canonical Amino Acids.甲烷古菌 ISO4-G1 的吡咯赖氨酰-tRNA 合成酶的晶体结构及其基于结构的工程改造,用于高效的非天然氨基酸扩展细胞游离遗传密码子。
Int J Mol Sci. 2023 Mar 26;24(7):6256. doi: 10.3390/ijms24076256.
5
A designed photoenzyme for enantioselective [2+2] cycloadditions.用于对映选择性 [2+2] 环加成的设计光酶。
Nature. 2022 Nov;611(7937):709-714. doi: 10.1038/s41586-022-05335-3. Epub 2022 Sep 21.
6
Enantioselective [2+2]-cycloadditions with triplet photoenzymes.手性[2+2]环加成与三重态光酶。
Nature. 2022 Nov;611(7937):715-720. doi: 10.1038/s41586-022-05342-4. Epub 2022 Sep 21.
7
The road to fully programmable protein catalysis.通往完全可编程的蛋白质催化之路。
Nature. 2022 Jun;606(7912):49-58. doi: 10.1038/s41586-022-04456-z. Epub 2022 Jun 1.
8
New opportunities for genetic code expansion in synthetic yeast.在合成酵母中扩展遗传密码的新机会。
Curr Opin Biotechnol. 2022 Jun;75:102691. doi: 10.1016/j.copbio.2022.102691. Epub 2022 Feb 10.
9
Rewiring the "Push-Pull" Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code.利用扩展遗传密码重编血红素酶的“推-拉”催化机制
ACS Catal. 2020 Feb 21;10(4):2735-2746. doi: 10.1021/acscatal.9b05129. Epub 2020 Jan 29.
10
Stereoselective Cyclopropanation of Electron-Deficient Olefins with a Cofactor Redesigned Carbene Transferase Featuring Radical Reactivity.通过具有自由基反应性的辅因子重新设计的卡宾转移酶对缺电子烯烃进行立体选择性环丙烷化反应。
ACS Catal. 2019 Oct 4;9(10):9683-9697. doi: 10.1021/acscatal.9b02272. Epub 2019 Sep 5.