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来自埃塞俄比亚亚的斯亚贝巴蔬菜农场的分离株:抗菌药敏谱及相关耐药基因标记

isolates from vegetable farms in Addis Ababa, Ethiopia: Antimicrobial susceptibility profile and associated resistance genetic markers.

作者信息

Hailu Woinshet, Alemayehu Haile, Hailu Lulit, Medhin Girmay, Rajashekara Gireesh, Gebreyes Wondwossen A, Eguale Tadesse

机构信息

Aklilu Lemma Institute of Pathobiology Addis Ababa University Addis Ababa Ethiopia.

College of Health Sciences Addis Ababa University Addis Ababa Ethiopia.

出版信息

Food Sci Nutr. 2024 Mar 10;12(6):4122-4132. doi: 10.1002/fsn3.4071. eCollection 2024 Jun.

Abstract

The use of animal manure to fertilize soil is an emerging concern contributing to the transfer of antimicrobial-resistant pathogens to vegetables. Hence, assessing antimicrobial susceptibility profile of in vegetable farms is essential to design appropriate interventions against antimicrobial resistance (AMR) in the food chain. This study assessed antimicrobial resistance profile and associated genetic markers among isolated from vegetable farms fertilized with animal manure in Addis Ababa, Ethiopia. A total of 1044 samples were collected using convenience sampling: soil ( = 271), manure ( = 375), and vegetables ( = 398) from 81 vegetable farms in Addis Ababa, Ethiopia. Antimicrobial susceptibility test was conducted for 100 isolates and antimicrobial resistance genes (ARGs) were tested by polymerase chain reaction (PCR). Of the 1044 collected samples, 25.3% were positive for , with significantly higher prevalence in the manure sample and samples collected from Akaki Kality sub-city ( < .05). The highest resistance rate was recorded for tetracycline (72%), followed by streptomycin (63%), and sulfamethoxazole +trimethoprim (56%). Multidrug resistance was detected in 61% of the isolates. The (76.9%), (65.4%), (), (58.3%), and (51.7%) were the commonly detected resistance genes. The current study showed a high burden of antimicrobial resistance among isolated from manure-amended vegetable farms, with potential of playing a significant role in the dissemination of antimicrobial resistance in the food chain. Efforts should be made to reduce the burden of resistant organisms and ARGs through prudent use of antimicrobials in livestock and application of appropriate composting techniques before using manure as fertilizer.

摘要

使用动物粪便给土壤施肥正成为一个新的关注点,因为这会导致抗微生物病原体传播到蔬菜中。因此,评估蔬菜农场中[未提及具体对象,原文此处表述不清]的抗菌药物敏感性概况对于设计针对食物链中抗菌药物耐药性(AMR)的适当干预措施至关重要。本研究评估了从埃塞俄比亚亚的斯亚贝巴使用动物粪便施肥的蔬菜农场分离出的[未提及具体对象,原文此处表述不清]中的抗菌药物耐药性概况及相关基因标记。采用便利抽样法共收集了1044份样本:来自埃塞俄比亚亚的斯亚贝巴81个蔬菜农场的土壤(n = 271)、粪便(n = 375)和蔬菜(n = 398)。对100株[未提及具体对象,原文此处表述不清]分离株进行了抗菌药物敏感性测试,并通过聚合酶链反应(PCR)检测了抗菌药物耐药基因(ARGs)。在收集的1044份样本中,25.3%的[未提及具体对象,原文此处表述不清]呈阳性,粪便样本以及从阿卡基卡利蒂次市收集的样本中患病率显著更高(P < 0.05)。四环素的耐药率最高(72%),其次是链霉素(63%)和磺胺甲恶唑+甲氧苄啶(56%)。在61%的[未提及具体对象,原文此处表述不清]分离株中检测到多重耐药性。常见的耐药基因有blaTEM(76.9%)、blaCTX-M(65.4%)、tetA()、sul1(58.3%)和ermB(51.7%)。当前研究表明,从施用粪便的蔬菜农场分离出的[未提及具体对象,原文此处表述不清]中抗菌药物耐药性负担较高,其有可能在食物链中抗菌药物耐药性的传播中发挥重要作用。应通过在牲畜中谨慎使用抗菌药物以及在将粪便用作肥料之前应用适当的堆肥技术来努力减轻耐药生物和ARGs的负担。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27a9/11167155/9676455ccdf4/FSN3-12-4122-g001.jpg

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