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生物污损海绵作为海洋脊椎动物生物多样性监测的天然 eDNA 采样器。

Biofouling sponges as natural eDNA samplers for marine vertebrate biodiversity monitoring.

机构信息

School of Biological & Environmental Sciences, Liverpool John Moores University, Liverpool L3 3AF, UK; Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla 666303, China.

Ocean and Ecosystem Sciences Division, Fisheries and Oceans Canada, Bedford Institute of Oceanography, Dartmouth, NS B2Y 4A2, Canada.

出版信息

Sci Total Environ. 2024 Oct 10;946:174148. doi: 10.1016/j.scitotenv.2024.174148. Epub 2024 Jun 19.

Abstract

Environmental DNA (eDNA) analysis has now become a core approach in marine biodiversity research, which typically involves the collection of water or sediment samples. Yet, recently, filter-feeding organisms have received much attention for their potential role as natural eDNA samplers. While the indiscriminate use of living organisms as 'sampling tools' might in some cases raise conservation concerns, there are instances in which highly abundant sessile organisms may become a nuisance as biofouling on artificial marine structures. Here we demonstrate how a sea sponge species that colonizes the moorings of the world's largest curtain of hydroacoustic receivers can become a powerful natural collector of fish biodiversity information. By sequencing eDNA extracted from Vazella pourtalesii retrieved from moorings during routine biofouling maintenance, we detected 23 species of marine fish and mammals, compared to 19 and 15 species revealed by surface and bottom water eDNA respectively, and 28 species captured by groundfish survey in the surrounding area, which are more ecologically impactful and involve higher additional costs. Sponge-based species inventories proved at least as informative as those obtained by traditional survey methods, and are also able to detect seasonal differences in fish assemblages. We conclude that opportunistic sampling of marine sponge biofouling may become an efficient way to document and monitor biodiversity in our rapidly changing oceans.

摘要

环境 DNA(eDNA)分析现已成为海洋生物多样性研究的核心方法,通常涉及采集水样或底泥样。然而,最近,滤食性生物因其作为天然 eDNA 采样器的潜在作用而受到广泛关注。虽然在某些情况下,将活体生物作为“采样工具”无差别地使用可能会引发保护问题,但在某些情况下,高度丰富的固着生物可能会成为人工海洋结构上生物污损的麻烦。在这里,我们展示了一种生活在世界上最大的水声接收器幕帘系泊处的海绵物种如何成为鱼类生物多样性信息的强大天然采集者。通过对从系泊物上定期进行生物污损维护时取回的 Vazella pourtalesii 中提取的 eDNA 进行测序,我们检测到了 23 种海洋鱼类和哺乳动物,而通过表面和底层水样 eDNA 分别检测到了 19 种和 15 种,通过周围地区的底栖鱼类调查捕获了 28 种,这些鱼类在生态上更具影响力,并且涉及更高的额外成本。基于海绵的物种名录证明与传统调查方法获得的名录同样具有信息量,并且还能够检测到鱼类群落的季节性差异。我们得出结论,海洋海绵生物污损的机会性采样可能成为记录和监测快速变化的海洋中生物多样性的有效方法。

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