Unidad de Investigaciones en Biomedicina. Zurita & Zurita Laboratorios, Quito, Ecuador; Facultad de Medicina. Pontificia Universidad Católica del Ecuador, Quito, Ecuador.
Unidad de Investigaciones en Biomedicina. Zurita & Zurita Laboratorios, Quito, Ecuador.
J Glob Antimicrob Resist. 2024 Sep;38:332-338. doi: 10.1016/j.jgar.2024.07.003. Epub 2024 Jul 15.
In Ecuador, data on molecular epidemiology, as well as circulating clones, are limited. Therefore, this study aims to know the population structure of Pseudomonas aeruginosa by identifying clones in clinical samples in Quito-Ecuador.
A significant set (45) clinical P. aeruginosa isolates were selected, including multidrug and non-multidrug resistant isolates, which were assigned to sequence types (STs) and compared with their antibiotic susceptibility profile. The genetic diversity was assessed by applying the multilocus sequence typing (MLST) scheme and the genetic relationships between different STs were corroborated by phylogenetic networks.
The MLST analysis identified 24 different STs and the most prevalent STs were ST-3750 and ST-253. The majority of the multidrug-resistance (MDR) isolates were included in ST-3750 and ST-253, also 3 singleton STs were identified as MDR isolates. The 21 different STs were found in non-multidrug resistance (non-MDR) isolates, and only 3 STs were found in more the one isolate.
The population structure of clinical P. aeruginosa present in these isolates indicates a significant association between MDR isolates and the clonal types: all ST-3750 and ST-253 isolates were MDR. ST-3750 is a closely related strain to the clonal complex ST111 (CC111). ST-253 and ST111 are a group of successful high-risk clones widely distributed worldwide. The multiresistant isolates studied are grouped in the most prevalent STs found, and the susceptible isolates correspond mainly with singleton STs. Therefore, these high-risk clones and their association with MDR phenotypes are contributing to the spread of MDR in Quito, Ecuador.
在厄瓜多尔,有关分子流行病学和循环克隆的信息有限。因此,本研究旨在通过鉴定厄瓜多尔基多临床样本中的克隆,了解铜绿假单胞菌的种群结构。
选择了 45 个有代表性的临床铜绿假单胞菌分离株,包括多药耐药和非多药耐药分离株,对其进行序列分型(ST)并与其抗生素敏感性谱进行比较。通过应用多位点序列分型(MLST)方案评估遗传多样性,并通过遗传网络图证实不同 ST 之间的遗传关系。
MLST 分析确定了 24 个不同的 ST,最常见的 ST 是 ST-3750 和 ST-253。大多数多药耐药(MDR)分离株包括在 ST-3750 和 ST-253 中,也鉴定出 3 个单体 ST 为 MDR 分离株。在非多药耐药(非 MDR)分离株中发现了 21 个不同的 ST,只有 3 个 ST 在一个以上的分离株中发现。
这些分离株中临床铜绿假单胞菌的种群结构表明,MDR 分离株与克隆类型之间存在显著关联:所有 ST-3750 和 ST-253 分离株均为 MDR。ST-3750 与克隆复合体 ST111(CC111)密切相关。ST-253 和 ST111 是一组广泛分布于世界各地的成功高风险克隆。研究中多耐药分离株被分组到发现的最常见 ST 中,而敏感分离株主要对应单体 ST。因此,这些高风险克隆及其与 MDR 表型的关联正在导致厄瓜多尔基多 MDR 的传播。