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蜕皮节肢动物:完整的遗传工具包综述。

The moulting arthropod: a complete genetic toolkit review.

机构信息

Department of Ecology and Evolution, Quartier UNIL-Sorge, Bâtiment Biophore, University of Lausanne, Lausanne, 1015, Switzerland.

SIB Swiss Institute of Bioinformatics, Quartier Sorge, Bâtiment Amphipôle, Lausanne, 1015, Switzerland.

出版信息

Biol Rev Camb Philos Soc. 2024 Dec;99(6):2338-2375. doi: 10.1111/brv.13123. Epub 2024 Jul 22.

DOI:10.1111/brv.13123
PMID:39039636
Abstract

Exoskeletons are a defining character of all arthropods that provide physical support for their segmented bodies and appendages as well as protection from the environment and predation. This ubiquitous yet evolutionarily variable feature has been instrumental in facilitating the adoption of a variety of lifestyles and the exploitation of ecological niches across all environments. Throughout the radiation that produced the more than one million described modern species, adaptability afforded by segmentation and exoskeletons has led to a diversity that is unrivalled amongst animals. However, because of the limited extensibility of exoskeleton chitin and cuticle components, they must be periodically shed and replaced with new larger ones, notably to accommodate the growing individuals encased within. Therefore, arthropods grow discontinuously by undergoing periodic moulting events, which follow a series of steps from the preparatory pre-moult phase to ecdysis itself and post-moult maturation of new exoskeletons. Each event represents a particularly vulnerable period in an arthropod's life cycle, so processes must be tightly regulated and meticulously executed to ensure successful transitions for normal growth and development. Decades of research in representative arthropods provide a foundation of understanding of the mechanisms involved. Building on this, studies continue to develop and test hypotheses on the presence and function of molecular components, including neuropeptides, hormones, and receptors, as well as the so-called early, late, and fate genes, across arthropod diversity. Here, we review the literature to develop a comprehensive overview of the status of accumulated knowledge of the genetic toolkit governing arthropod moulting. From biosynthesis and regulation of ecdysteroid and sesquiterpenoid hormones, to factors involved in hormonal stimulation responses and exoskeleton remodelling, we identify commonalities and differences, as well as highlighting major knowledge gaps, across arthropod groups. We examine the available evidence supporting current models of how components operate together to prepare for, execute, and recover from ecdysis, comparing reports from Chelicerata, Myriapoda, Crustacea, and Hexapoda. Evidence is generally highly taxonomically imbalanced, with most reports based on insect study systems. Biases are also evident in research on different moulting phases and processes, with the early triggers and late effectors generally being the least well explored. Our synthesis contrasts knowledge based on reported observations with reasonably plausible assumptions given current taxonomic sampling, and exposes weak assumptions or major gaps that need addressing. Encouragingly, advances in genomics are driving a diversification of tractable study systems by facilitating the cataloguing of putative genetic toolkits in previously under-explored taxa. Analysis of genome and transcriptome data supported by experimental investigations have validated the presence of an "ultra-conserved" core of arthropod genes involved in moulting processes. The molecular machinery has likely evolved with elaborations on this conserved pathway backbone, but more taxonomic exploration is needed to characterise lineage-specific changes and novelties. Furthermore, linking these to transformative innovations in moulting processes across Arthropoda remains hampered by knowledge gaps and hypotheses based on untested assumptions. Promisingly however, emerging from the synthesis is a framework that highlights research avenues from the underlying genetics to the dynamic molecular biology through to the complex physiology of moulting.

摘要

外骨骼是所有节肢动物的特征,为它们的分段身体和附肢提供物理支撑,并提供环境和捕食防御。这种无处不在但在进化上具有变异性的特征,对于各种生活方式的采用和在所有环境中生态位的利用都至关重要。在产生 100 多万种现代物种的辐射过程中,节肢动物的适应性和外骨骼的适应性导致了无与伦比的多样性。然而,由于外骨骼几丁质和角质层成分的延展性有限,它们必须定期脱落并被新的更大的外骨骼取代,特别是为了容纳包裹在里面的不断生长的个体。因此,节肢动物通过周期性的蜕皮事件不断地生长,这些事件遵循一系列从准备蜕皮前阶段到蜕皮本身和新外骨骼的蜕皮后成熟的步骤。每个事件都是节肢动物生命周期中特别脆弱的时期,因此必须严格调控和精心执行这些过程,以确保正常生长和发育的顺利过渡。几十年的代表性节肢动物研究为理解所涉及的机制提供了基础。在此基础上,研究继续开发和测试关于分子成分(包括神经肽、激素和受体)以及所谓的早期、晚期和命运基因在节肢动物多样性中的存在和功能的假设。在这里,我们回顾文献,以全面了解控制节肢动物蜕皮的遗传工具包的积累知识状况。从蜕皮甾醇和倍半萜类激素的生物合成和调节,到涉及激素刺激反应和外骨骼重塑的因素,我们确定了节肢动物群体之间的异同,并突出了主要的知识差距。我们检查了支持当前关于组件如何协同作用为蜕皮做准备、执行和恢复的模型的现有证据,比较了来自螯肢动物、多足动物、甲壳动物和六足动物的报告。证据在很大程度上是高度分类不平衡的,大多数报告基于昆虫研究系统。在不同蜕皮阶段和过程的研究中也存在偏见,早期触发因素和晚期效应因子通常是探索最少的。我们的综合分析将基于报告观察的证据与基于当前分类学抽样的合理假设进行对比,揭示了需要解决的假设不成立或主要差距。令人鼓舞的是,基因组学的进展通过促进以前探索较少的分类群中假定遗传工具包的编目,推动了更具可操作性的研究系统的多样化。实验研究支持的基因组和转录组数据分析验证了参与蜕皮过程的节肢动物“超保守”核心基因的存在。这种分子机制可能是在这个保守途径的基础上进化而来的,但需要更多的分类学探索来描述谱系特异性的变化和新颖性。此外,将这些与节肢动物门中蜕皮过程的变革性创新联系起来仍然受到知识差距和基于未经测试的假设的假设的阻碍。然而,有希望的是,从综合中浮现出一个框架,突出了从基础遗传学到动态分子生物学再到蜕皮复杂生理学的研究途径。

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