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新种和新种,两种从珠江口分离得到的新型黄杆菌。

sp. nov. and sp. nov., two novel flavobacteria isolated from the Pearl River Estuary.

机构信息

State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Stress Biology, School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, PR China.

Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, Guangdong, PR China.

出版信息

Int J Syst Evol Microbiol. 2024 Jul;74(7). doi: 10.1099/ijsem.0.006471.

Abstract

Two strains, designated as SYSU M80004 and SYSU M80005, were isolated from water sampled in the Pearl River Estuary, Guangzhou, Guangdong, PR China. The strains were Gram-stain-negative and aerobic. Strain SYSU M80004 could grow at pH 6.0-8.0 (optimum, pH 7.0), 22-30 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0 %). Strain SYSU M80005 could grow at pH 6.0-8.0 (optimum, pH 7.0), 4-37 °C (optimum, 28 °C) and in the presence of 0-1 % NaCl (w/v; optimum 0%). Both strains contained MK-6 as the predominant menaquinone. C and iso-C were identified as the major fatty acids (>10 %) of strain SYSU M80004 while strain SYSU M80005 contained iso-C and iso-C 3-OH as major fatty acids. Phosphatidylethanolamine was present as the major polar lipid in both strains. The average nucleotide identity and digital DNA-DNA hybridization values between these two strains and their closest relatives were 73.5-79.3 % and 19.6-23.2 %, respectively. Phylogenetic analysis based on the 16S rRNA gene and genomic sequences indicated they belonged to the genus . Therefore, on the basis of phenotypic, physiological, chemotaxonomic and genomic evidence, two novel species, sp. nov. (type strain=SYSU M80004=CDMCC 1.4522=KCTC 102268) and sp. nov. (type strain=SYSU M80005=CGMCC 1.4523= KCTC 102269) are proposed.

摘要

两株菌株,分别命名为 SYSU M80004 和 SYSU M80005,从中国广东省广州珠江口采集的水样中分离得到。这些菌株革兰氏阴性,需氧。SYSU M80004 株可在 pH 值 6.0-8.0(最佳 pH 值为 7.0)、22-30°C(最佳温度为 28°C)和 0-1%NaCl(w/v;最佳为 0%)的条件下生长。SYSU M80005 株可在 pH 值 6.0-8.0(最佳 pH 值为 7.0)、4-37°C(最佳温度为 28°C)和 0-1%NaCl(w/v;最佳为 0%)的条件下生长。两株菌均以 MK-6 为主要类异戊二烯醌。SYSU M80004 株的主要脂肪酸(>10%)为 C 和 iso-C,而 SYSU M80005 株的主要脂肪酸为 iso-C 和 iso-C 3-OH。磷脂酰乙醇胺是两株菌的主要极性脂。这两株菌与其最接近的亲缘菌株之间的平均核苷酸同一性和数字 DNA-DNA 杂交值分别为 73.5-79.3%和 19.6-23.2%。基于 16S rRNA 基因和基因组序列的系统发育分析表明,它们属于 属。因此,基于表型、生理、化学分类和基因组证据,提出了两个新种,即 sp. nov.(模式菌株=SYSU M80004=CDMCC 1.4522=KCTC 102268)和 sp. nov.(模式菌株=SYSU M80005=CGMCC 1.4523=KCTC 102269)。

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