Arastonejad Mahshid, Arab Daniyal, Fatemi Somayeh, Golshanrad Pezhman
Department of Human and Molecular Genetics, Virginia Commonwealth University, Richmond, VA, USA.
Department of Human Genetics, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Cancer Inform. 2024 Jun 23;23:11769351241262211. doi: 10.1177/11769351241262211. eCollection 2024.
Adrenocortical carcinoma (ACC), a rare and aggressive adrenal cortex cancer, poses significant challenges due to high mortality, poor prognosis, and early post-surgery recurrence. Variability in survival across ACC stages emphasizes the need to uncover its molecular underpinnings. Adrenocortical adenoma, a benign tumor, adds to diagnostic challenges, highlighting the necessity for molecular insights. The Non-SMC Associated Condensin Complex (NCAP) gene family, recognized for roles in chromosomal structure and cell cycle control. This study focuses on evaluating NCAP gene functions and importance in ACC through gene expression profiling to identify diagnostic and therapeutic targets.
Microarray datasets from ACC patients, obtained from the Gene Expression Omnibus database, were normalized to eliminate batch effects. Differential expression analysis of NCAP family genes, facilitated by the GEPIA2 database, included survival and pathological stage evaluations. A Protein-Protein Interaction network was constructed using GeneMANIA, and additional insights were gained through Gene Ontology enrichment analysis, correlation analysis, and ROC curve analysis.
ACC samples exhibited elevated levels of NCAPG, NCAPG2, and NCAPH compared to normal and adenoma samples. Increased expression of these genes correlated with poor overall survival, particularly in advanced disease stages. The Protein-Protein Interaction network highlighted interactions with related proteins, and Gene Ontology enrichment analysis demonstrated their involvement in chromosomal structure and control. Differentially expressed NCAP genes showed positive associations, and ROC curve analysis indicated their high discriminatory power in identifying ACC from adenoma and normal samples.
The study emphasizes the potential importance of NCAPG, NCAPG2, and NCAPH in ACC, suggesting roles in tumor aggressiveness and diagnostic relevance. These genes could serve as therapeutic targets and markers for ACC, but further exploration into their molecular activities and validation studies is imperative to fully harness their diagnostic and therapeutic potential, advancing precision medicine approaches against this rare but lethal malignancy.
肾上腺皮质癌(ACC)是一种罕见且侵袭性强的肾上腺皮质癌,因其高死亡率、预后不良和术后早期复发而带来重大挑战。ACC各阶段生存率的差异凸显了揭示其分子基础的必要性。肾上腺皮质腺瘤是一种良性肿瘤,增加了诊断难度,突出了分子洞察的必要性。非SMC相关凝聚素复合体(NCAP)基因家族以其在染色体结构和细胞周期控制中的作用而闻名。本研究旨在通过基因表达谱评估NCAP基因在ACC中的功能和重要性,以确定诊断和治疗靶点。
从基因表达综合数据库获取ACC患者的微阵列数据集,进行标准化以消除批次效应。借助GEPIA2数据库对NCAP家族基因进行差异表达分析,包括生存和病理分期评估。使用GeneMANIA构建蛋白质-蛋白质相互作用网络,并通过基因本体富集分析、相关性分析和ROC曲线分析获得更多见解。
与正常和腺瘤样本相比,ACC样本中NCAPG、NCAPG2和NCAPH水平升高。这些基因的表达增加与总体生存率差相关,尤其是在疾病晚期。蛋白质-蛋白质相互作用网络突出了与相关蛋白质的相互作用,基因本体富集分析表明它们参与染色体结构和控制。差异表达的NCAP基因显示出正相关,ROC曲线分析表明它们在从腺瘤和正常样本中识别ACC方面具有高鉴别力。
该研究强调了NCAPG、NCAPG2和NCAPH在ACC中的潜在重要性,表明它们在肿瘤侵袭性和诊断相关性方面的作用。这些基因可作为ACC的治疗靶点和标志物,但必须进一步探索其分子活性并进行验证研究,以充分发挥其诊断和治疗潜力,推进针对这种罕见但致命恶性肿瘤的精准医学方法。