• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

工程化双功能半乳糖激酶/尿苷基转移酶嵌合体以增强UDP-D-木糖的生产

Engineering Bifunctional Galactokinase/Uridyltransferase Chimera for Enhanced UDP-d-Xylose Production.

作者信息

Zhuang Jin-Da, Shi Jin-Min, Hong Chen-Cheng, Wu Ting-Ting, Liu Li, Voglmeir Josef

机构信息

Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology Nanjing Agricultural University, 1 Weigang, 210095 Nanjing, China.

出版信息

JACS Au. 2024 Jun 20;4(7):2557-2563. doi: 10.1021/jacsau.4c00288. eCollection 2024 Jul 22.

DOI:10.1021/jacsau.4c00288
PMID:39055162
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11267548/
Abstract

The biotechnological production of uridine diphosphate-d-xylose (UDP-d-xylose), the glycosyl donor in enzymatic for d-xylose, is an important precursor for advancing glycoengineering research on biopharmaceuticals such as heparin and glycosaminoglycans. Leveraging a recently discovered UDP-xylose salvage pathway, we have engineered a series of bifunctional chimeric biocatalysts derived from galactokinase/uridyltransferase, facilitating the conversion of d-xylose to UDP-d-xylose. This study elucidates the novel assembly of eight fusion protein constructs, differing in domain orientations and linker peptide lengths, to investigate their functional expression in , resulting in the synthesis of the first bifunctional enzyme that orchestrates a direct transformation from d-xylose to UDP-d-xylose. Fusion constructs with a NH-GSGGGSGHM-COOH peptide linker demonstrated the highest expression and catalytic tenacity. For the highest catalytic conversion from d-xylose to UDP-d-xylose, we established an optimum pH of 7.0 and a temperature optimum of 30 °C, with an optimal fusion enzyme concentration of 3.3 mg/mL for large-scale UDP-d-xylose production. Insights into ATP and ADP inhibition further helped to optimize the reaction conditions. Testing various ratios of unfused galactokinase and uridyltransferase biocatalysts for UDP-xylose synthesis from d-xylose revealed that a 1:1 ratio was optimal. The / value for the NH-GSGGGSGHM-COOH peptide linker showed a 10% improvement compared with the unfused counterparts. The strategic design of these fusion enzymes efficiently routes for the convenient and efficient biocatalytic synthesis of xylosides in biotechnological and pharmaceutical applications.

摘要

尿苷二磷酸 - D - 木糖(UDP - D - 木糖)是用于D - 木糖的酶促反应中的糖基供体,其生物技术生产是推进肝素和糖胺聚糖等生物制药的糖工程研究的重要前体。利用最近发现的UDP - 木糖补救途径,我们设计了一系列源自半乳糖激酶/尿苷基转移酶的双功能嵌合生物催化剂,促进D - 木糖向UDP - D - 木糖的转化。本研究阐明了八种融合蛋白构建体的新型组装,这些构建体在结构域方向和连接肽长度上有所不同,以研究它们在大肠杆菌中的功能表达,从而合成了第一种协调从D - 木糖直接转化为UDP - D - 木糖的双功能酶。具有NH₂ - GSGGGSGHM - COOH肽接头的融合构建体表现出最高的表达和催化活性。为了实现从D - 木糖到UDP - D - 木糖的最高催化转化率,我们确定了最佳pH值为7.0,最佳温度为30℃,大规模生产UDP - D - 木糖的最佳融合酶浓度为3.3 mg/mL。对ATP和ADP抑制作用的深入了解进一步有助于优化反应条件。测试不同比例的未融合半乳糖激酶和尿苷基转移酶生物催化剂用于从D - 木糖合成UDP - 木糖,结果表明1:1的比例是最佳的。与未融合的对应物相比,NH₂ - GSGGGSGHM - COOH肽接头的kcat/Km值提高了10%。这些融合酶的策略性设计为生物技术和制药应用中方便高效地生物催化合成木糖苷提供了有效途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/bab94d0c9082/au4c00288_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/cf1080726438/au4c00288_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/ae0d92451613/au4c00288_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/3f04294ca35b/au4c00288_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/bab94d0c9082/au4c00288_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/cf1080726438/au4c00288_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/ae0d92451613/au4c00288_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/3f04294ca35b/au4c00288_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f4a8/11267548/bab94d0c9082/au4c00288_0004.jpg

相似文献

1
Engineering Bifunctional Galactokinase/Uridyltransferase Chimera for Enhanced UDP-d-Xylose Production.工程化双功能半乳糖激酶/尿苷基转移酶嵌合体以增强UDP-D-木糖的生产
JACS Au. 2024 Jun 20;4(7):2557-2563. doi: 10.1021/jacsau.4c00288. eCollection 2024 Jul 22.
2
Establishment of a five-enzyme cell-free cascade for the synthesis of uridine diphosphate N-acetylglucosamine.建立一种五酶无细胞级联反应体系用于合成尿苷二磷酸 N-乙酰葡萄糖胺。
J Biotechnol. 2018 Oct 10;283:120-129. doi: 10.1016/j.jbiotec.2018.07.027. Epub 2018 Jul 22.
3
Functional characterization of the UDP-xylose biosynthesis pathway in Rhodothermus marinus.海栖嗜热放线菌中UDP-木糖生物合成途径的功能表征
Appl Microbiol Biotechnol. 2015 Nov;99(22):9463-72. doi: 10.1007/s00253-015-6683-1. Epub 2015 Jun 2.
4
Reconstruction of de novo pathway for synthesis of UDP-glucuronic acid and UDP-xylose from intrinsic UDP-glucose in Saccharomyces cerevisiae.在酿酒酵母中从内源性尿苷二磷酸葡萄糖重建合成尿苷二磷酸葡萄糖醛酸和尿苷二磷酸木糖的从头途径。
FEBS J. 2006 Jun;273(12):2645-57. doi: 10.1111/j.1742-4658.2006.05281.x.
5
Transcriptome-guided gene isolation and functional characterization of UDP-xylose synthase and UDP-D-apiose/UDP-D-xylose synthase families from Ornithogalum caudatum Ait.基于转录组的虎眼万年青UDP-木糖合酶和UDP-D-芹糖/UDP-D-木糖合酶家族基因分离及功能鉴定
Plant Cell Rep. 2016 Nov;35(11):2403-2421. doi: 10.1007/s00299-016-2044-5. Epub 2016 Sep 3.
6
Real-time NMR monitoring of intermediates and labile products of the bifunctional enzyme UDP-apiose/UDP-xylose synthase.双功能酶UDP-芹糖/UDP-木糖合酶中间体和不稳定产物的实时核磁共振监测
Carbohydr Res. 2009 Jun 12;344(9):1072-8. doi: 10.1016/j.carres.2009.03.026. Epub 2009 Mar 27.
7
Enzymatic Redox Cascade for One-Pot Synthesis of Uridine 5'-Diphosphate Xylose from Uridine 5'-Diphosphate Glucose.用于从5'-二磷酸尿苷葡萄糖一锅法合成5'-二磷酸尿苷木糖的酶促氧化还原级联反应。
Adv Synth Catal. 2014 Nov 24;356(17):3575-3584. doi: 10.1002/adsc.201400766. Epub 2014 Nov 5.
8
Biosynthesis of chondroitin sulfate. Solubilization of chondroitin sulfate glycosyltransferases and partial purification of uridine diphosphate-D-galactose:D-xylose galactosyltrans.硫酸软骨素的生物合成。硫酸软骨素糖基转移酶的溶解及尿苷二磷酸 - D - 半乳糖:D - 木糖半乳糖基转移酶的部分纯化。
J Biol Chem. 1975 Jul 10;250(13):5200-7.
9
Analysis of UDP-D-apiose/UDP-D-xylose synthase-catalyzed conversion of UDP-D-apiose phosphonate to UDP-D-xylose phosphonate: implications for a retroaldol-aldol mechanism.分析 UDP-D-岩藻糖/ UDP-D-木糖合酶催化 UDP-D-岩藻糖磷酸酯向 UDP-D-木糖磷酸酯的转化:对 retroaldol-aldol 机制的启示。
J Am Chem Soc. 2012 Aug 29;134(34):13946-9. doi: 10.1021/ja305322x. Epub 2012 Aug 15.
10
Optimization of the enzymatic one pot reaction for the synthesis of uridine 5'-diphosphogalactose.优化酶法一锅法合成尿苷 5′-二磷酸半乳糖。
Bioprocess Biosyst Eng. 2010 Jan;33(1):71-8. doi: 10.1007/s00449-009-0365-2.

本文引用的文献

1
Engineered as a Biosynthetic Platform of Nucleotide Sugars.作为核苷酸糖的生物合成平台进行工程设计。
ACS Synth Biol. 2024 Apr 19;13(4):1215-1224. doi: 10.1021/acssynbio.3c00666. Epub 2024 Mar 11.
2
Construction and Evaluation of Peptide-Linked β-Galactosidase Heterodimers.构建和评价肽连接的β-半乳糖苷酶杂二聚体。
Protein Pept Lett. 2021;28(2):221-228. doi: 10.2174/0929866527666200813201242.
3
Spatial organization of multi-enzyme biocatalytic cascades.多酶生物催化级联反应的空间组织
Org Biomol Chem. 2017 May 23;15(20):4260-4271. doi: 10.1039/c7ob00391a.
4
Influences of Various Peptide Linkers on the Thermotoga maritima MSB8 Nitrilase Displayed on the Spore Surface of Bacillus subtilis.各种肽接头对展示在枯草芽孢杆菌孢子表面的嗜热栖热菌MSB8腈水解酶的影响
J Mol Microbiol Biotechnol. 2017;27(1):64-71. doi: 10.1159/000454813. Epub 2017 Jan 20.
5
Binding pattern of intermediate UDP-4-keto-xylose to human UDP-xylose synthase: Synthesis and STD NMR of model keto-saccharides.中间产物UDP-4-酮基木糖与人UDP-木糖合酶的结合模式:模型酮糖的合成与STD NMR
Carbohydr Res. 2017 Jan 2;437:50-58. doi: 10.1016/j.carres.2016.11.001. Epub 2016 Nov 5.
6
Mutations of Arabidopsis TBL32 and TBL33 Affect Xylan Acetylation and Secondary Wall Deposition.拟南芥TBL32和TBL33的突变影响木聚糖乙酰化和次生壁沉积。
PLoS One. 2016 Jan 8;11(1):e0146460. doi: 10.1371/journal.pone.0146460. eCollection 2016.
7
Probing of the reaction pathway of human UDP-xylose synthase with site-directed mutagenesis.利用定点突变探究人尿苷二磷酸木糖合酶的反应途径。
Carbohydr Res. 2015 Oct 30;416:1-6. doi: 10.1016/j.carres.2015.08.006. Epub 2015 Aug 17.
8
Functional characterization of the UDP-xylose biosynthesis pathway in Rhodothermus marinus.海栖嗜热放线菌中UDP-木糖生物合成途径的功能表征
Appl Microbiol Biotechnol. 2015 Nov;99(22):9463-72. doi: 10.1007/s00253-015-6683-1. Epub 2015 Jun 2.
9
Molecular cloning of a novel glucuronokinase/putative pyrophosphorylase from zebrafish acting in an UDP-glucuronic acid salvage pathway.从斑马鱼中克隆出一种新型葡萄糖醛酸激酶/推定的焦磷酸化酶,其作用于尿苷二磷酸葡萄糖醛酸补救途径。
PLoS One. 2014 Feb 28;9(2):e89690. doi: 10.1371/journal.pone.0089690. eCollection 2014.
10
Negative regulation of notch signaling by xylose.木糖对 Notch 信号通路的负调控作用。
PLoS Genet. 2013 Jun;9(6):e1003547. doi: 10.1371/journal.pgen.1003547. Epub 2013 Jun 6.