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基于有限元网格生成的虚拟计算机断层扫描肺部模型

In-silico CT lung phantom generated from finite-element mesh.

作者信息

Neelakantan Sunder, Mukherjee Tanmay, Smith Bradford J, Myers Kyle, Rizi Rahim, Avazmohammadi Reza

机构信息

Department of Biomedical Engineering, Texas A&M University, College Station, TX, USA.

Department of Bioengineering, University of Colorado Denver | Anschutz Medical Campus, Aurora, CO, USA.

出版信息

Proc SPIE Int Soc Opt Eng. 2024 Feb;12928. doi: 10.1117/12.3006973. Epub 2024 Mar 29.

Abstract

Several lung diseases lead to alterations in regional lung mechanics, including ventilator- and radiation-induced lung injuries. Such alterations can lead to localized underventilation of the affected areas, resulting in the overdistension of the surrounding healthy regions. Thus, there has been growing interest in quantifying the dynamics of the lung parenchyma using regional biomechanical markers. Image registration through dynamic imaging has emerged as a powerful tool to assess lung parenchyma's kinematic and deformation behaviors during respiration. However, the difficulty in validating the image registration estimation of lung deformation, primarily due to the lack of ground-truth deformation data, has limited its use in clinical settings. To address this barrier, we developed a method to convert a finite-element (FE) mesh of the lung into a phantom computed tomography (CT) image, advantageously possessing ground-truth information included in the FE model. The phantom CT images generated from the FE mesh replicated the geometry of the lung and large airways that were included in the FE model. Using spatial frequency response, we investigated the effect of " imaging parameters" such as voxel size (resolution) and proximity threshold values on image quality. A series of high-quality phantom images generated from the FE model simulating the respiratory cycle will allow for the validation and evaluation of image registration-based estimations of lung deformation. In addition, the present method could be used to generate synthetic data needed to train machine-learning models to estimate kinematic biomarkers from medical images that could serve as important diagnostic tools to assess heterogeneous lung injuries.

摘要

几种肺部疾病会导致局部肺力学改变,包括呼吸机相关性肺损伤和放射性肺损伤。此类改变可导致受影响区域局部通气不足,进而导致周围健康区域过度扩张。因此,使用区域生物力学标志物来量化肺实质动力学的研究兴趣日益浓厚。通过动态成像进行图像配准已成为评估肺实质在呼吸过程中的运动学和变形行为的有力工具。然而,由于缺乏真实的变形数据,难以验证肺变形的图像配准估计结果,这限制了其在临床环境中的应用。为解决这一障碍,我们开发了一种方法,将肺的有限元(FE)网格转换为体模计算机断层扫描(CT)图像,该图像有利地包含了FE模型中的真实信息。从FE网格生成的体模CT图像复制了FE模型中包含的肺和大气道的几何形状。我们使用空间频率响应,研究了体素大小(分辨率)和邻近阈值等“成像参数”对图像质量的影响。从模拟呼吸周期的FE模型生成的一系列高质量体模图像,将有助于验证和评估基于图像配准的肺变形估计。此外,本方法可用于生成训练机器学习模型所需的合成数据,以便从医学图像中估计运动学生物标志物,这些标志物可作为评估异质性肺损伤的重要诊断工具。

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本文引用的文献

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Deep learning-based lung image registration: A review.基于深度学习的肺部图像配准:综述。
Comput Biol Med. 2023 Oct;165:107434. doi: 10.1016/j.compbiomed.2023.107434. Epub 2023 Sep 1.
3
Computational lung modelling in respiratory medicine.计算呼吸医学中的肺部建模。
J R Soc Interface. 2022 Jun;19(191):20220062. doi: 10.1098/rsif.2022.0062. Epub 2022 Jun 8.
10
Creating thoracic phantoms for diagnostic and procedural ultrasound training.创建用于诊断和操作超声培训的胸部体模。
Australas J Ultrasound Med. 2012 May;15(2):43-54. doi: 10.1002/j.2205-0140.2012.tb00226.x. Epub 2015 Dec 31.

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