College of Pharmaceutical Science & Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, Zhejiang University of Technology, Hangzhou 310014, China.
Mar Drugs. 2024 Jun 26;22(7):296. doi: 10.3390/md22070296.
Traditional isolation methods often lead to the rediscovery of known natural products. In contrast, genome mining strategies are considered effective for the continual discovery of new natural products. In this study, we discovered a unique prenyltransferase (PT) through genome mining, capable of catalyzing the transfer of a prenyl group to an aromatic nucleus to form C-C or C-O bonds. A pair of new hydroxyphenylacetic acid derivative enantiomers with prenyl units, (±)-peniprenydiol A (), along with 16 known compounds (-), were isolated from a marine fungus, sp. W21C371. The separation of using chiral HPLC led to the isolation of the enantiomers and . Their structures were established on the basis of extensive spectroscopic analysis, including 1D, 2D NMR and HRESIMS. The absolute configurations of the new compounds were determined by a modified Mosher method. A plausible biosynthetic pathway for was deduced, facilitated by PT catalysis. In the in vitro assay, and showed promising inhibitory activity against -glucuronidase (EcGUS), with IC values of 44.60 ± 0.84 μM and 21.60 ± 0.76 μM, respectively, compared to the positive control, -saccharic acid 1,4-lactone hydrate (DSL). This study demonstrates the advantages of genome mining in the rational acquisition of new natural products.
传统的分离方法往往导致已知天然产物的重新发现。相比之下,基因组挖掘策略被认为是发现新天然产物的有效方法。在这项研究中,我们通过基因组挖掘发现了一种独特的 prenyltransferase(PT),它能够催化将 prenyl 基团转移到芳香核上形成 C-C 或 C-O 键。一对新的具有 prenyl 单元的羟苯基乙酸衍生物对映异构体(±)-peniprenydiol A(),以及 16 种已知化合物(),从海洋真菌 sp. W21C371 中分离得到。使用手性 HPLC 分离得到对映异构体和。根据广泛的光谱分析,包括 1D、2D NMR 和 HRESIMS,确定了它们的结构。通过改进的 Mosher 方法确定了新化合物的绝对构型。通过 PT 催化,推导出了的可能生物合成途径。在体外测定中,和对 -葡萄糖醛酸酶(EcGUS)表现出有希望的抑制活性,IC 值分别为 44.60 ± 0.84 μM 和 21.60 ± 0.76 μM,与阳性对照 -蔗糖 1,4-内酯水合物(DSL)相比。这项研究证明了基因组挖掘在合理获取新天然产物方面的优势。