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动态拓扑数据分析:一种基于分形维数的新型测试框架及其在脑信号中的应用。

Dynamic topological data analysis: a novel fractal dimension-based testing framework with application to brain signals.

作者信息

El-Yaagoubi Anass B, Chung Moo K, Ombao Hernando

机构信息

Statistics Program, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.

Department of Biostatistics & Medical Informatics, University of Wisconsin-Madison, Madison, WI, United States.

出版信息

Front Neuroinform. 2024 Jul 12;18:1387400. doi: 10.3389/fninf.2024.1387400. eCollection 2024.

Abstract

Topological data analysis (TDA) is increasingly recognized as a promising tool in the field of neuroscience, unveiling the underlying topological patterns within brain signals. However, most TDA related methods treat brain signals as if they were static, i.e., they ignore potential non-stationarities and irregularities in the statistical properties of the signals. In this study, we develop a novel fractal dimension-based testing approach that takes into account the dynamic topological properties of brain signals. By representing EEG brain signals as a sequence of Vietoris-Rips filtrations, our approach accommodates the inherent non-stationarities and irregularities of the signals. The application of our novel fractal dimension-based testing approach in analyzing dynamic topological patterns in EEG signals during an epileptic seizure episode exposes noteworthy alterations in total persistence across 0, 1, and 2-dimensional homology. These findings imply a more intricate influence of seizures on brain signals, extending beyond mere amplitude changes.

摘要

拓扑数据分析(TDA)在神经科学领域日益被视为一种有前景的工具,它揭示了脑信号中潜在的拓扑模式。然而,大多数与TDA相关的方法将脑信号视为静态的,即它们忽略了信号统计特性中潜在的非平稳性和不规则性。在本研究中,我们开发了一种基于分形维数的新型测试方法,该方法考虑了脑信号的动态拓扑特性。通过将脑电图(EEG)脑信号表示为一系列Vietoris-Rips过滤,我们的方法适应了信号固有的非平稳性和不规则性。我们基于分形维数的新型测试方法在分析癫痫发作期间EEG信号的动态拓扑模式中的应用揭示了0、1和2维同调中总持续性的显著变化。这些发现意味着癫痫发作对脑信号的影响更为复杂,不仅仅局限于幅度变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d16/11272560/8ec1b979eb73/fninf-18-1387400-g0001.jpg

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