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甜菜根蛆基因组数据集序列注释,TmSBRM_v1.0

The annotation of genomic dataset sequences of the sugar beet root maggot , TmSBRM_v1.0.

作者信息

Acharya Sudha, Alkharouf Nadim W, Chu Chenggen, Klink Vincent P

机构信息

Department of Computer and Information Sciences, Towson University, Towson, MD, 21252, USA.

USDA-ARS-NA- Northern Great Plains Research Laboratory, 1307N 18TH ST, Northern Crop Science Laboratory, Fargo, ND 58102, USA.

出版信息

Data Brief. 2024 Jul 9;55:110710. doi: 10.1016/j.dib.2024.110710. eCollection 2024 Aug.

Abstract

, the sugar beet root maggot (SBRM), is a devastating insect pathogen of sugar beet, one of only two plants in the world from which sugar is widely produced, accounting for 55% of U.S. sugar and 35% of global raw sugar with an annual farm value of $3 billion in the United States. is capable of causing total crop failure, making its study important. The previously released SBRM genome, TmSBRM_v1.0, has been generated from the assembled draft genome sequence of isolated that was isolated from field-grown in North Dakota, USA. The annotation of the is presented here. The annotated genome should be useful in understanding the biology of this insect and the development of new control strategies for this pathogen, relationship to model genetic organisms like and aid in agronomic improvement of sugar beet for stakeholders while also providing information on the relationship between the SBRM and climate change.

摘要

甜菜根蛆(SBRM)是甜菜的一种毁灭性昆虫病原体,甜菜是世界上仅有的两种广泛用于制糖的植物之一,在美国,甜菜糖占美国食糖产量的55%,占全球原糖产量的35%,在美国每年的农场产值达30亿美元。它能够导致作物绝收,因此对其进行研究很重要。之前发布的SBRM基因组TmSBRM_v1.0是从美国北达科他州田间种植的甜菜中分离出的个体的组装草图基因组序列生成的。本文展示了该基因组的注释。注释后的基因组应有助于理解这种昆虫的生物学特性,开发针对这种病原体的新控制策略,了解其与模式遗传生物(如[此处原文缺失具体生物名称])的关系,并有助于为利益相关者改良甜菜的农艺性状,同时还能提供有关SBRM与气候变化之间关系的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da41/11286982/f97f9ee3ac2e/gr1.jpg

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