Megur Ashwinipriyadarshini, Lastauskienė Eglė, Burokas Aurelijus
Department of Biological Models, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio Ave. 7, LT, Vilnius 10257, Lithuania.
Department of Microbiology and Biotechnology, Institute of Biosciences, Life Sciences Center, Vilnius University, Sauletekio Ave. 7, LT, Vilnius 10257, Lithuania.
Data Brief. 2024 Jul 14;55:110750. doi: 10.1016/j.dib.2024.110750. eCollection 2024 Aug.
This strain was isolated from traditionally (homemade) fermented Lithuanian cherry tomatoes. The genome consists of 55 contigs with a total size of 3,326,119 bp, an N50 of 170738, and a GC% of 44.3 %. According to the COG annotation, most of these proteins were divided into three categories related to transcription (K category: 307), amino acid transport and metabolism (E category: 222), and carbohydrate transport and metabolism (G category: 268). No genes associated with antimicrobial resistance or virulence factors were identified. The data presented here can be used in comparative genomics to identify antimicrobial resistance genes and virulence factors that may be present in relevant species. PlasmidFinder server revealed the presence of plasmid pR18 (assessment number JN601038) in the genome that has lincomycin resistance, can be transferred from one bacterium to another, and is one of the most common plasmids in the genera and . The draft genome sequence data have been deposited with NCBI under Bioproject under accession number PRJNA947394.
该菌株是从传统（自制）发酵的立陶宛樱桃番茄中分离出来的。基因组由55个重叠群组成，总大小为3326119 bp，N50为170738，GC含量为44.3%。根据COG注释，这些蛋白质大多分为三类，分别与转录（K类：307）、氨基酸转运与代谢（E类：222）以及碳水化合物转运与代谢（G类：268）有关。未鉴定出与抗菌抗性或毒力因子相关的基因。此处呈现的数据可用于比较基因组学，以鉴定相关物种中可能存在的抗菌抗性基因和毒力因子。PlasmidFinder服务器显示该基因组中存在质粒pR18（评估编号JN601038），其具有林可霉素抗性，可从一种细菌转移到另一种细菌，是该属中最常见的质粒之一。基因组草图序列数据已存入NCBI的生物项目中，登录号为PRJNA947394。
