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(2S,3S)-2-氨基-3-羟基-3-甲基-4-苯氧基丁酸二水合物的(3 + 1)维非公度结构中的职业调制。

Occupational modulation in the (3+1)-dimensional incommensurate structure of (2S,3S)-2-amino-3-hydroxy-3-methyl-4-phenoxybutanoic acid dihydrate.

作者信息

Sanders Kyana M, Bruffy Samantha K, Buller Andrew R, Petříček Václav, Guzei Ilia A

机构信息

Department of Chemistry, University of Wisconsin-Madison, 1101 University Ave, Madison, WI 53706, USA.

Department of Structure Analysis, Institute of Physics of the Czech Academy of Sciences, Na Slovance 2, 182 00 Prague 8, Czech Republic.

出版信息

Acta Crystallogr C Struct Chem. 2024 Sep 1;80(Pt 9):523-533. doi: 10.1107/S2053229624007009. Epub 2024 Aug 8.

Abstract

The incommensurately modulated structure of (2S,3S)-2-amino-3-hydroxy-3-methyl-4-phenoxybutanoic acid dihydrate (CHNO·2HO or I·2HO) is described in the (3+1)-dimensional superspace group P222(0β0)000 (β = 0.357). The loss of the three-dimensional periodicity is ascribed to the occupational modulation of one positionally disordered solvent water molecule, where the two positions are related by a small translation [ca 0.666 (9) Å] and ∼168 (5)° rotation about one of its O-H bonds, with an average 0.624 (3):0.376 (3) occupancy ratio. The occupational modulation of this molecule arises due to the competition between the different hydrogen-bonding motifs associated with each position. The structure can be very well refined in the average approximation (all satellite reflections disregarded) in the space group P222, with the water molecule refined as disordered over two positions in a 0.625 (16):0.375 (16) ratio. The refinement in the commensurate threefold supercell approximation in the space group P112 is also of high quality, with the six corresponding water molecules exhibiting three different occupancy ratios averaging 0.635:0.365.

摘要

描述了二水合(2S,3S)-2-氨基-3-羟基-3-甲基-4-苯氧基丁酸(CHNO·2HO或I·2HO)的非公度调制结构,其处于(3 + 1)维超空间群P222(0β0)000(β = 0.357)中。三维周期性的丧失归因于一个位置无序的溶剂水分子的占据调制,其中两个位置通过一个小的平移[约0.666 (9) Å]以及围绕其一个O - H键旋转约168 (5)°相关,平均占据率为0.624 (3):0.376 (3)。该分子的占据调制是由于与每个位置相关的不同氢键模式之间的竞争引起的。在空间群P222的平均近似(忽略所有卫星反射)下,该结构可以很好地精修,水分子在两个位置上以0.625 (16):0.375 (16)的比例无序精修。在空间群P112的 commensurate 三重超晶胞近似下的精修质量也很高,六个相应的水分子呈现出三种不同的占据率,平均为0.635:0.365。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78f0/11371000/14ba41954736/c-80-00523-fig1.jpg

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