Bascom Palmer Eye Institute, University of Miami, Miami, FL, USA.
Wills Eye Hospital, Thomas Jefferson University Hospital, Philadelphia, PA, USA.
Cell Biochem Biophys. 2024 Dec;82(4):3667-3679. doi: 10.1007/s12013-024-01455-x. Epub 2024 Aug 8.
This study aims to compare the levels of intrinsic protein disorder within the human lens and zonule proteomes and investigate the role of aging as a potential influencing factor on disorder levels. A cross-sectional proteomic analysis was employed, utilizing a dataset of 1466 proteins derived from the lens and zonule proteomes previously published by Wang et al. and De Maria et al. Bioinformatics tools, including a composition profiler and a rapid intrinsic disorder analysis online tool, were used to conduct a comparative analysis of protein disorder. Statistical tests such as ANOVA, Tukey's HSD, and chi-squared tests were applied to evaluate differences between groups. The study revealed distinct amino acid compositions for each proteome, showing a direct correlation between aging and increased protein disorder in the zonular proteomes, whereas the lens proteomes exhibited the opposite trend. Findings suggest that age-related changes in intrinsic protein disorder within the lens and zonule proteomes may be linked to structural transformations in these tissues. Understanding how protein disorder evolves with age could enhance knowledge of the molecular basis for age-related conditions such as cataracts and pseudoexfoliation, potentially leading to better therapeutic strategies.
本研究旨在比较人眼晶状体和悬韧带蛋白质组中内在蛋白质无序的水平,并探讨衰老作为潜在影响因素对无序水平的作用。采用了一种跨组学蛋白质组分析方法,利用 Wang 等人和 De Maria 等人先前发表的来自晶状体和悬韧带蛋白质组的 1466 种蛋白质的数据集。使用了包括组成分析器和快速内在无序分析在线工具在内的生物信息学工具来进行蛋白质无序的比较分析。应用了方差分析、Tukey 的 HSD、卡方检验等统计检验方法来评估组间的差异。研究揭示了每个蛋白质组的独特氨基酸组成,表明在悬韧带蛋白质组中,衰老与蛋白质无序的增加呈直接相关,而在晶状体蛋白质组中则呈现相反的趋势。研究结果表明,晶状体和悬韧带蛋白质组中内在蛋白质无序的年龄相关变化可能与这些组织的结构转化有关。了解蛋白质无序如何随年龄演变,可能会增强对与年龄相关的条件(如白内障和假性剥脱)的分子基础的认识,从而可能导致更好的治疗策略。