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用于从结直肠癌全切片成像检测微卫星不稳定性的人工智能模型

Artificial Intelligence Models for the Detection of Microsatellite Instability from Whole-Slide Imaging of Colorectal Cancer.

作者信息

Faa Gavino, Coghe Ferdinando, Pretta Andrea, Castagnola Massimo, Van Eyken Peter, Saba Luca, Scartozzi Mario, Fraschini Matteo

机构信息

Dipartimento di Scienze Mediche e Sanità Pubblica, University of Cagliari, 09123 Cagliari, Italy.

UOC Laboratorio Analisi, AOU of Cagliari, 09123 Cagliari, Italy.

出版信息

Diagnostics (Basel). 2024 Jul 25;14(15):1605. doi: 10.3390/diagnostics14151605.

DOI:10.3390/diagnostics14151605
PMID:39125481
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11311951/
Abstract

With the advent of whole-slide imaging (WSI), a technology that can digitally scan whole slides in high resolution, pathology is undergoing a digital revolution. Detecting microsatellite instability (MSI) in colorectal cancer is crucial for proper treatment, as it identifies patients responsible for immunotherapy. Even though universal testing for MSI is recommended, particularly in patients affected by colorectal cancer (CRC), many patients remain untested, and they reside mainly in low-income countries. A critical need exists for accessible, low-cost tools to perform MSI pre-screening. Here, the potential predictive role of the most relevant artificial intelligence-driven models in predicting microsatellite instability directly from histology alone is discussed, focusing on CRC. The role of deep learning (DL) models in identifying the MSI status is here analyzed in the most relevant studies reporting the development of algorithms trained to this end. The most important performance and the most relevant deficiencies are discussed for every AI method. The models proposed for algorithm sharing among multiple research and clinical centers, including federal learning (FL) and swarm learning (SL), are reported. According to all the studies reported here, AI models are valuable tools for predicting MSI status on WSI alone in CRC. The use of digitized H&E-stained sections and a trained algorithm allow the extraction of relevant molecular information, such as MSI status, in a short time and at a low cost. The possible advantages related to introducing DL methods in routine surgical pathology are underlined here, and the acceleration of the digital transformation of pathology departments and services is recommended.

摘要

随着全切片成像(WSI)技术的出现,这项能够对全切片进行高分辨率数字扫描的技术,病理学正在经历一场数字革命。检测结直肠癌中的微卫星不稳定性(MSI)对于正确治疗至关重要,因为它能识别出适合免疫治疗的患者。尽管推荐进行MSI的普遍检测,特别是在受结直肠癌(CRC)影响的患者中,但许多患者仍未接受检测,且他们主要分布在低收入国家。迫切需要可及的、低成本的工具来进行MSI预筛查。在此,讨论了最相关的人工智能驱动模型在仅从组织学直接预测微卫星不稳定性方面的潜在预测作用,重点是结直肠癌。本文在最相关的研究中分析了深度学习(DL)模型在识别MSI状态方面的作用,这些研究报告了为此目的训练的算法的开发情况。讨论了每种人工智能方法的最重要性能和最相关不足。报告了为多个研究和临床中心之间的算法共享而提出的模型,包括联邦学习(FL)和群体学习(SL)。根据本文报道的所有研究,人工智能模型是仅在结直肠癌中通过WSI预测MSI状态的有价值工具。使用数字化苏木精和伊红染色切片以及经过训练的算法,可以在短时间内以低成本提取相关分子信息,如MSI状态。本文强调了在常规手术病理学中引入DL方法可能带来的优势,并建议加速病理科和服务的数字化转型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0c2/11311951/a4e0a28207ee/diagnostics-14-01605-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0c2/11311951/a4e0a28207ee/diagnostics-14-01605-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b0c2/11311951/a4e0a28207ee/diagnostics-14-01605-g001.jpg

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本文引用的文献

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Diagnostics (Basel). 2023 Dec 31;14(1):99. doi: 10.3390/diagnostics14010099.
2
Validation of MSIntuit as an AI-based pre-screening tool for MSI detection from colorectal cancer histology slides.验证 MSIntuit 作为一种基于人工智能的工具,用于从结直肠癌组织学幻灯片中进行 MSI 检测的预筛选。
Nat Commun. 2023 Nov 6;14(1):6695. doi: 10.1038/s41467-023-42453-6.
3
Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study.
基于自监督深度学习的癌症病理切片的可泛化生物标志物预测:一项回顾性多中心研究。
Cell Rep Med. 2023 Apr 18;4(4):100980. doi: 10.1016/j.xcrm.2023.100980. Epub 2023 Mar 22.
4
Reproducibility of deep learning in digital pathology whole slide image analysis.深度学习在数字病理学全切片图像分析中的可重复性。
PLOS Digit Health. 2022 Dec 2;1(12):e0000145. doi: 10.1371/journal.pdig.0000145. eCollection 2022 Dec.
5
Fast and label-free automated detection of microsatellite status in early colon cancer using artificial intelligence integrated infrared imaging.利用人工智能集成红外成像技术对早期结肠癌微卫星状态进行快速且无标记的自动检测。
Eur J Cancer. 2023 Mar;182:122-131. doi: 10.1016/j.ejca.2022.12.026. Epub 2023 Jan 9.
6
Deep Learning Approaches in Histopathology.组织病理学中的深度学习方法
Cancers (Basel). 2022 Oct 26;14(21):5264. doi: 10.3390/cancers14215264.
7
Clinical actionability of triaging DNA mismatch repair deficient colorectal cancer from biopsy samples using deep learning.利用深度学习对活检样本中 DNA 错配修复缺陷的结直肠癌进行临床分类。
EBioMedicine. 2022 Jul;81:104120. doi: 10.1016/j.ebiom.2022.104120. Epub 2022 Jun 23.
8
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Med Image Anal. 2022 Jul;79:102464. doi: 10.1016/j.media.2022.102464. Epub 2022 Apr 29.
9
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