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源自缓步动物蛋白的肽的结构适应性和表面活性。

Structural adaptability and surface activity of peptides derived from tardigrade proteins.

机构信息

Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Amsterdam, The Netherlands.

Max Planck Institute for Polymer Research, Mainz, Germany.

出版信息

Protein Sci. 2024 Sep;33(9):e5135. doi: 10.1002/pro.5135.

Abstract

Tardigrades are unique micro-organisms with a high tolerance to desiccation. The protection of their cells against desiccation involves tardigrade-specific proteins, which include the so-called cytoplasmic abundant heat soluble (CAHS) proteins. As a first step towards the design of peptides capable of mimicking the cytoprotective properties of CAHS proteins, we have synthesized several model peptides with sequences selected from conserved CAHS motifs and investigated to what extent they exhibit the desiccation-induced structural changes of the full-length proteins. Using circular dichroism spectroscopy, two-dimensional infrared spectroscopy, and molecular dynamics simulations, we have found that the CAHS model peptides are mostly disordered, but adopt a more -helical structure upon addition of 2,2,2-trifluoroethanol, which mimics desiccation. This structural behavior is similar to that of full-length CAHS proteins, which also adopt more ordered conformations upon desiccation. We also have investigated the surface activity of the peptides at the air/water interface, which also mimics partial desiccation. Interestingly, sum-frequency generation spectroscopy shows that all model peptides are surface active and adopt a helical structure at the air/water interface. Our results suggest that amino acids with high helix-forming propensities might contribute to the propensity of these peptides to adopt a helical structure when fully or partially dehydrated. Thus, the selected sequences retain part of the CAHS structural behavior upon desiccation, and might be used as a basis for the design of new synthetic peptide-based cryoprotective materials.

摘要

缓步动物是具有高干燥耐受性的独特微生物。它们的细胞对干燥的保护涉及到缓步动物特异性蛋白,其中包括所谓的细胞质丰富热可溶性(CAHS)蛋白。作为设计能够模拟 CAHS 蛋白细胞保护特性的肽的第一步,我们已经合成了几种具有从保守 CAHS 基序中选择的序列的模型肽,并研究了它们在多大程度上表现出全长蛋白的干燥诱导结构变化。使用圆二色性光谱、二维红外光谱和分子动力学模拟,我们发现 CAHS 模型肽主要是无规的,但在添加模拟干燥的 2,2,2-三氟乙醇时,它们会采用更多的 α-螺旋结构。这种结构行为类似于全长 CAHS 蛋白,其在干燥时也会采用更有序的构象。我们还研究了肽在空气/水界面的表面活性,这也模拟了部分干燥。有趣的是,和频产生光谱表明,所有模型肽都是表面活性的,在空气/水界面采用螺旋结构。我们的结果表明,具有高螺旋形成倾向的氨基酸可能有助于这些肽在完全或部分脱水时采用螺旋结构的倾向。因此,所选序列在干燥时保留了 CAHS 部分结构行为,并可能作为设计新的基于合成肽的冷冻保护材料的基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b79f/11328126/35044382d84e/PRO-33-e5135-g001.jpg

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