• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

L-DOPA 自动氧化:反应步骤的经验价键模拟。

L-DOPA Autoxidation: An Empirical Valence Bond Simulation of the Reactive Step.

机构信息

Laboratory for Computational Biochemistry and Drug Design, National Institute of Chemistry, Ljubljana 1000, Slovenia.

Networking Infrastructure Centre, Jožef Stefan Institute, Ljubljana 1000, Slovenia.

出版信息

J Phys Chem B. 2024 Sep 5;128(35):8355-8361. doi: 10.1021/acs.jpcb.4c03002. Epub 2024 Aug 24.

DOI:10.1021/acs.jpcb.4c03002
PMID:39180475
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11382278/
Abstract

L-DOPA, or levodopa, plays an important role in the treatment of Parkinson's disease, a debilitating neurological disorder. It acts as a precursor to dopamine, a neurotransmitter crucial for the regulation of motor functions. Administered orally, L-DOPA easily crosses the blood-brain barrier and converts into dopamine in the brain, relieving symptoms such as tremors and rigidity. However, its prolonged use can lead to complications. A significant concern with L-DOPA is its conversion to dopaquinone, a quinone metabolite that enters the redox cycle and continuously produces hydrogen peroxide. In addition, L-DOPA, which resembles tyrosine with an additional hydroxyl group, can randomly incorporate into the proteins of dopaminergic neurons and thus become an additional source of oxidative stress in Parkinson's patients. In this study, we scrutinized the rate-limiting step of L-DOPA autoxidation in aqueous solution. The reaction we studied is an intramolecular Michael addition concerted with a proton transfer from the amino group. Using the Empirical Valence Bond (EVB) method, we computed the free energy profiles of the reaction in water. The calculated barrier of 30.93 ± 1.12 kcal/mol is in reasonable agreement with the experimental barrier of 27.55 kcal/mol. This agreement confirms the validity of the studied mechanism and demonstrates the applicability of our simulation methodology for studying the autoxidation kinetics of L-DOPA within proteins.

摘要

L-多巴,即左旋多巴,在帕金森病的治疗中起着重要作用,帕金森病是一种使人虚弱的神经退行性疾病。它是多巴胺的前体,而多巴胺是调节运动功能的关键神经递质。L-多巴经口服给药时,很容易穿过血脑屏障,并在大脑中转化为多巴胺,从而缓解震颤和僵硬等症状。然而,其长期使用可能会导致并发症。L-多巴的一个重要问题是它会转化为多巴醌,一种醌代谢物,进入氧化还原循环,并不断产生过氧化氢。此外,L-多巴与额外的羟基相似,可随机掺入多巴胺能神经元的蛋白质中,从而成为帕金森病患者氧化应激的另一个来源。在这项研究中,我们仔细研究了水溶液中 L-多巴自动氧化的限速步骤。我们研究的反应是一个分子内迈克尔加成,伴随着氨基的质子转移。使用经验价键 (EVB) 方法,我们计算了水中反应的自由能曲线。计算得到的 30.93±1.12 kcal/mol 的能垒与实验得到的 27.55 kcal/mol 的能垒相当吻合。这种一致性证实了所研究的机制的有效性,并表明我们的模拟方法可用于研究蛋白质内 L-多巴自动氧化动力学。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/f861343ef438/jp4c03002_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/cbf6039c4431/jp4c03002_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/8e247d9f4412/jp4c03002_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/697d829f7fa3/jp4c03002_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/1b5f042b76a0/jp4c03002_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/c34a5c759a20/jp4c03002_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/f861343ef438/jp4c03002_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/cbf6039c4431/jp4c03002_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/8e247d9f4412/jp4c03002_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/697d829f7fa3/jp4c03002_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/1b5f042b76a0/jp4c03002_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/c34a5c759a20/jp4c03002_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238b/11382278/f861343ef438/jp4c03002_0006.jpg

相似文献

1
L-DOPA Autoxidation: An Empirical Valence Bond Simulation of the Reactive Step.L-DOPA 自动氧化:反应步骤的经验价键模拟。
J Phys Chem B. 2024 Sep 5;128(35):8355-8361. doi: 10.1021/acs.jpcb.4c03002. Epub 2024 Aug 24.
2
l-3,4-dihydroxyphenylalanine (l-DOPA) modulates brain iron, dopaminergic neurodegeneration and motor dysfunction in iron overload and mutant alpha-synuclein mouse models of Parkinson's disease.左旋多巴(l-DOPA)调节铁过载和突变α-突触核蛋白帕金森病小鼠模型中的脑铁、多巴胺能神经退行性变和运动功能障碍。
J Neurochem. 2019 Jul;150(1):88-106. doi: 10.1111/jnc.14676. Epub 2019 Mar 28.
3
Protective effects of L-dopa and carbidopa combined treatments on human catecholaminergic cells.左旋多巴和卡比多巴联合治疗对人儿茶酚胺能细胞的保护作用。
DNA Cell Biol. 2012 Nov;31(11):1572-9. doi: 10.1089/dna.2011.1546. Epub 2012 Sep 28.
4
Thermodynamic parameters of electrochemical oxidation of L-DOPA: experimental and theoretical studies.L-DOPA 电化学氧化的热力学参数:实验和理论研究。
J Phys Chem B. 2012 Oct 18;116(41):12552-7. doi: 10.1021/jp3054229. Epub 2012 Oct 8.
5
Electroenzymatic synthesis of l-DOPA.电酶合成 l-DOPA。
J Biotechnol. 2010 Mar;146(1-2):40-4. doi: 10.1016/j.jbiotec.2010.01.002. Epub 2010 Jan 18.
6
Dopamine- and L-beta-3,4-dihydroxyphenylalanine hydrochloride (L-Dopa)-induced cytotoxicity towards catecholaminergic neuroblastoma SH-SY5Y cells. Effects of oxidative stress and antioxidative factors.多巴胺和L-β-3,4-二羟基苯丙氨酸盐酸盐(L-多巴)对儿茶酚胺能神经母细胞瘤SH-SY5Y细胞的细胞毒性。氧化应激和抗氧化因子的影响。
Biochem Pharmacol. 1997 Feb 7;53(3):363-72. doi: 10.1016/s0006-2952(96)00731-9.
7
Interruption of the MnO2 oxidative process on dopamine and L-dopa by the action of S2O3(2-).通过S2O3(2-)的作用对多巴胺和左旋多巴的MnO2氧化过程的干扰。
J Inorg Biochem. 2001 Mar;84(1-2):89-96. doi: 10.1016/s0162-0134(00)00207-5.
8
DopAmide: Novel, Water-Soluble, Slow-Release l-dihydroxyphenylalanine (l-DOPA) Precursor Moderates l-DOPA Conversion to Dopamine and Generates a Sustained Level of Dopamine at Dopaminergic Neurons.DopAmide:新型、水溶性、缓释 l-二羟基苯丙氨酸(l-DOPA)前体,可调节 l-DOPA 向多巴胺的转化,并在多巴胺能神经元中产生持续的多巴胺水平。
CNS Neurosci Ther. 2016 Jun;22(6):461-7. doi: 10.1111/cns.12518. Epub 2016 Feb 10.
9
Dopamine- or L-DOPA-induced neurotoxicity: the role of dopamine quinone formation and tyrosinase in a model of Parkinson's disease.多巴胺或左旋多巴诱导的神经毒性:多巴胺醌形成和酪氨酸酶在帕金森病模型中的作用
Neurotox Res. 2003;5(3):165-76. doi: 10.1007/BF03033137.
10
Four pioneers of L-dopa treatment: Arvid Carlsson, Oleh Hornykiewicz, George Cotzias, and Melvin Yahr.左旋多巴治疗的四位先驱:阿尔维德·卡尔松、奥莱赫·霍尼基维茨、乔治·科齐亚斯和梅尔文·亚尔。
Mov Disord. 2015 Jan;30(1):19-36. doi: 10.1002/mds.26120. Epub 2014 Dec 8.

引用本文的文献

1
Efficient Multistate Free-Energy Calculations with QM/MM Accuracy Using Replica-Exchange Enveloping Distribution Sampling.使用副本交换包络分布采样实现具有量子力学/分子力学精度的高效多态自由能计算。
J Phys Chem B. 2025 Jun 19;129(24):5948-5960. doi: 10.1021/acs.jpcb.5c02086. Epub 2025 Jun 6.

本文引用的文献

1
First de novo deuterated drug poised for approval.首款有望获批的从头开始氘代药物。
Nat Rev Drug Discov. 2022 Sep;21(9):623-625. doi: 10.1038/d41573-022-00139-6.
2
Local Anesthetics Transfer Across the Membrane: Reproducing Octanol-Water Partition Coefficients by Solvent Reaction Field Methods.局部麻醉剂跨膜转移:通过溶剂反应场方法再现辛醇-水分配系数。
Acta Chim Slov. 2021 Jun;68(2):426-432.
3
A Novel Method for Creating a Synthetic L-DOPA Proteome and In Vitro Evidence of Incorporation.一种创建合成L-多巴蛋白质组的新方法及体外掺入证据。
Proteomes. 2021 May 24;9(2):24. doi: 10.3390/proteomes9020024.
4
Molecular design principles of Lysine-DOPA wet adhesion.赖氨酸-多巴湿黏附的分子设计原理。
Nat Commun. 2020 Aug 4;11(1):3895. doi: 10.1038/s41467-020-17597-4.
5
Nuclear quantum effects in enzymatic reactions: simulation of the kinetic isotope effect of phenylethylamine oxidation catalyzed by monoamine oxidase A.酶反应中的核量子效应:模拟单胺氧化酶 A 催化苯乙胺氧化的动力学同位素效应。
Phys Chem Chem Phys. 2020 Apr 6;22(13):6838-6847. doi: 10.1039/d0cp00131g.
6
How Important Is the Use of Cocaine and Amphetamines in the Development of Parkinson Disease? A Computational Study.可卡因和安非他命在帕金森病发展中的作用有多重要?一项计算研究。
Neurotox Res. 2020 Mar;37(3):724-731. doi: 10.1007/s12640-019-00149-0. Epub 2019 Dec 11.
7
Path Integral Calculation of the Hydrogen/Deuterium Kinetic Isotope Effect in Monoamine Oxidase A-Catalyzed Decomposition of Benzylamine.单胺氧化酶 A 催化苄胺分解的氢/氘动力学同位素效应的路径积分计算。
Molecules. 2019 Nov 28;24(23):4359. doi: 10.3390/molecules24234359.
8
Dopamine Autoxidation Is Controlled by Acidic pH.多巴胺自氧化受酸性pH值控制。
Front Mol Neurosci. 2018 Dec 18;11:467. doi: 10.3389/fnmol.2018.00467. eCollection 2018.
9
Effects of pH and Oxidants on the First Steps of Polydopamine Formation: A Thermodynamic Approach.pH 和氧化剂对聚多巴胺形成初始步骤的影响:热力学方法。
J Phys Chem B. 2018 Jun 21;122(24):6314-6327. doi: 10.1021/acs.jpcb.8b02304. Epub 2018 Jun 6.
10
Why does the Y326I mutant of monoamine oxidase B decompose an endogenous amphetamine at a slower rate than the wild type enzyme? Reaction step elucidated by multiscale molecular simulations.为什么单胺氧化酶B的Y326I突变体分解内源性苯丙胺的速度比野生型酶慢?通过多尺度分子模拟阐明反应步骤。
Phys Chem Chem Phys. 2018 Feb 7;20(6):4181-4188. doi: 10.1039/c7cp07069a.