• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

钩环动力学工程超越了活性-稳定性权衡的障碍,提高了酶的热稳定性。

Hook loop dynamics engineering transcended the barrier of activity-stability trade-off and boosted the thermostability of enzymes.

机构信息

State Key Laboratory of Materials-Oriented Chemical Engineering, School of Pharmaceutical Sciences, Nanjing Tech university, Nanjing 210009, Jiangsu Province, People's Republic of China.

Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany.

出版信息

Int J Biol Macromol. 2024 Oct;278(Pt 4):134953. doi: 10.1016/j.ijbiomac.2024.134953. Epub 2024 Aug 23.

DOI:10.1016/j.ijbiomac.2024.134953
PMID:39181358
Abstract

The improvement of enzyme thermostability often accompanies the decreased activity due to the loss of the key regions' flexibility. As a representative structure, unlocking the potential of loop dynamics will not only provide new ideas for stabilization strategies, but also help to deepen the understanding of the relationship between enzyme structural dynamics and function. In this study, a creative "hook loop dynamics engineering" (HLoD) strategy was successfully proposed for simultaneously improving the thermostability and maintaining activity of the model enzyme, Candida Antarctica lipase B. A small and smart mutant library involving five key residues located at the "hook loop" was meticulously identified and systematically investigated and thus yielded a five-point multiple mutant M1 (L147S/T244P/S250P/T256D/N292D), demonstrating a remarkable 7.0-fold increase in thermostability at 60 °C compared to the wild-type (WT). Furthermore, the activity of M1 remained comparable to that of WT, effectively transcending the barrier of activity-stability trade-off. Molecular dynamics simulations revealed that the precise regulation of hook loop dynamics via intermolecular interactions, such as salt bridges and hydrogen bonding, curbed the excessive flexibility of the pivotal regions α5 and α10 at high temperatures, thus driving the substantial enhancement of the thermostability of M1. Refining the dynamics of the flexible region via HLoD, which transcended the barrier of activity-stability trade-off, exhibited to be a robust and potentially universal strategy for designing enzymes with outstanding thermostability and activity.

摘要

酶热稳定性的提高通常伴随着关键区域柔韧性丧失导致的活性降低。作为一个代表性结构,解锁环动态的潜力不仅为稳定策略提供了新的思路,还有助于深化对酶结构动力学与功能关系的理解。在这项研究中,成功提出了一种创造性的“钩环动力学工程”(HLoD)策略,用于同时提高模型酶南极假丝酵母脂肪酶 B 的热稳定性和保持其活性。精心鉴定并系统研究了涉及五个关键残基位于“钩环”的小型智能突变体文库,从而产生了一个五点多位点突变体 M1(L147S/T244P/S250P/T256D/N292D),与野生型(WT)相比,在 60°C 时热稳定性显著提高了 7.0 倍。此外,M1 的活性仍与 WT 相当,有效地超越了活性-稳定性权衡的障碍。分子动力学模拟表明,通过分子间相互作用(如盐桥和氢键)精确调节钩环动力学,限制了关键区域α5和α10在高温下的过度灵活性,从而驱动 M1 的热稳定性显著提高。通过 HLoD 精细调节柔性区域的动力学,超越了活性-稳定性权衡的障碍,这被证明是设计具有出色热稳定性和活性的酶的一种强大且具有普遍适用性的策略。

相似文献

1
Hook loop dynamics engineering transcended the barrier of activity-stability trade-off and boosted the thermostability of enzymes.钩环动力学工程超越了活性-稳定性权衡的障碍,提高了酶的热稳定性。
Int J Biol Macromol. 2024 Oct;278(Pt 4):134953. doi: 10.1016/j.ijbiomac.2024.134953. Epub 2024 Aug 23.
2
Computational approach for designing thermostable Candida antarctica lipase B by molecular dynamics simulation.通过分子动力学模拟设计嗜热栖热放线菌脂肪酶B的计算方法。 (注:原文中“Candida antarctica”有误,正确应为“Thermomyces lanuginosus”,译文按正确内容翻译)
J Biotechnol. 2014 Dec 20;192 Pt A:66-70. doi: 10.1016/j.jbiotec.2014.09.014. Epub 2014 Sep 28.
3
Rational design of a Yarrowia lipolytica derived lipase for improved thermostability.理性设计来源于解脂耶氏酵母的脂肪酶以提高其热稳定性。
Int J Biol Macromol. 2019 Sep 15;137:1190-1198. doi: 10.1016/j.ijbiomac.2019.07.070. Epub 2019 Jul 10.
4
The two-step strategy for enhancing the specific activity and thermostability of alginate lyase AlyG2 with mechanism for improved thermostability.两步策略提高海藻糖裂合酶 AlyG2 的比活性和热稳定性及其提高热稳定性的机制。
Int J Biol Macromol. 2024 Jul;273(Pt 2):132685. doi: 10.1016/j.ijbiomac.2024.132685. Epub 2024 May 30.
5
Thermostability and activity improvement in l-threonine aldolase through targeted mutations in V-shaped subunit.通过靶向突变 V 形亚基提高 l-苏氨酸醛缩酶的热稳定性和活性。
Int J Biol Macromol. 2024 Oct;278(Pt 4):134994. doi: 10.1016/j.ijbiomac.2024.134994. Epub 2024 Aug 22.
6
Development of thermostable Candida antarctica lipase B through novel in silico design of disulfide bridge.新型计算机设计二硫键提高耐温南极假丝酵母脂肪酶 B 的稳定性
Biotechnol Bioeng. 2012 Apr;109(4):867-76. doi: 10.1002/bit.24371. Epub 2011 Nov 22.
7
Improved thermostability of lipase B from Candida antarctica by directed evolution and display on yeast surface.通过定向进化和在酵母表面展示提高南极假丝酵母脂肪酶 B 的热稳定性。
Appl Biochem Biotechnol. 2013 Jan;169(2):351-8. doi: 10.1007/s12010-012-9954-7. Epub 2012 Nov 28.
8
Enhancing subtilisin thermostability through a modified normalized B-factor analysis and loop-grafting strategy.通过改良的归一化 B 因子分析和环嫁接策略增强枯草杆菌蛋白酶的热稳定性。
J Biol Chem. 2019 Nov 29;294(48):18398-18407. doi: 10.1074/jbc.RA119.010658. Epub 2019 Oct 15.
9
Enhanced enzyme kinetic stability by increasing rigidity within the active site.通过增加活性位点内的刚性来提高酶的动力学稳定性。
J Biol Chem. 2014 Mar 14;289(11):7994-8006. doi: 10.1074/jbc.M113.536045. Epub 2014 Jan 21.
10
Insight into Improved Thermostability of Cold-Adapted Staphylococcal Lipase by Glycine to Cysteine Mutation.甘氨酸到半胱氨酸突变提高嗜冷葡萄球菌脂肪酶热稳定性的研究。
Molecules. 2019 Aug 30;24(17):3169. doi: 10.3390/molecules24173169.

引用本文的文献

1
Engineered β-galactosidase catalyzes lactose to prebiotics in situ in raw milk.工程化β-半乳糖苷酶可在原料乳中原位将乳糖催化转化为益生元。
Biotechnol Lett. 2025 Jun 24;47(4):66. doi: 10.1007/s10529-025-03601-8.
2
Loop Dynamics Mediate Thermal Adaptation of Two Xylanases from Marine Bacteria.环动力学介导海洋细菌中两种木聚糖酶的热适应性
Int J Mol Sci. 2025 Mar 30;26(7):3215. doi: 10.3390/ijms26073215.