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多组学筛查确定了介导环境化学物质暴露对心脏代谢性状影响的CpG位点和基因。

Multiomics Screening Identified CpG Sites and Genes That Mediate the Impact of Exposure to Environmental Chemicals on Cardiometabolic Traits.

作者信息

Nikpay Majid

机构信息

Omics and Biomedical Analysis Core Facility, University of Ottawa Heart Institute, Ottawa, ON K1Y 4W7, Canada.

出版信息

Epigenomes. 2024 Jul 29;8(3):29. doi: 10.3390/epigenomes8030029.

Abstract

An understanding of the molecular mechanism whereby an environmental chemical causes a disease is important for the purposes of future applications. In this study, a multiomics workflow was designed to combine several publicly available datasets in order to identify CpG sites and genes that mediate the impact of exposure to environmental chemicals on cardiometabolic traits. Organophosphate and prenatal lead exposure were previously reported to change methylation level at the cg23627948 site. The outcome of the analyses conducted in this study revealed that, as the cg23627948 site becomes methylated, the expression of the gene decreases, which leads to a higher body fat percentage. Prenatal perfluorooctane sulfonate exposure was reported to increase the methylation level at the cg21153102 site. Findings of this study revealed that higher methylation at this site contributes to higher diastolic blood pressure by changing the expression of and genes. Moreover, mediates the impact of B12 supplementation → cg05280698 hypermethylation on higher kidney function, while mediates the impact of air pollution → cg03186999 hypomethylation on higher systolic blood pressure. This study investigates CpG sites and genes that mediate the impact of environmental chemicals on cardiometabolic traits. Furthermore, the multiomics approach described in this study provides a convenient workflow with which to investigate the impact of an environmental factor on the body's biomarkers, and, consequently, on health conditions, using publicly available data.

摘要

了解环境化学物质导致疾病的分子机制对于未来的应用目的很重要。在本研究中,设计了一种多组学工作流程,以整合几个公开可用的数据集,从而识别介导环境化学物质暴露对心脏代谢特征影响的CpG位点和基因。先前有报道称有机磷酸酯和产前铅暴露会改变cg23627948位点的甲基化水平。本研究进行的分析结果显示,随着cg23627948位点甲基化,该基因的表达下降,这导致更高的体脂百分比。据报道,产前全氟辛烷磺酸暴露会增加cg21153102位点的甲基化水平。本研究的结果表明,该位点较高的甲基化通过改变某些基因的表达导致更高的舒张压。此外,某物质介导了维生素B12补充→cg05280698高甲基化对更高肾功能的影响,而另一物质介导了空气污染→cg03186999低甲基化对更高收缩压的影响。本研究调查了介导环境化学物质对心脏代谢特征影响的CpG位点和基因。此外,本研究中描述的多组学方法提供了一种便捷的工作流程,利用公开可用的数据来研究环境因素对人体生物标志物的影响,进而对健康状况的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/11348123/fc998533de99/epigenomes-08-00029-g001.jpg

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