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深度学习加速等离子体传感增强的纳米粒子识别。

Enhanced Nanoparticle Recognition via Deep Learning-Accelerated Plasmonic Sensing.

机构信息

Department of Electronic Science, Xiamen University, Xiamen 361005, China.

出版信息

Biosensors (Basel). 2024 Jul 26;14(8):363. doi: 10.3390/bios14080363.

DOI:10.3390/bios14080363
PMID:39194592
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11353015/
Abstract

Surface plasmon microscopy proves to be a potent tool for capturing interferometric scattering imaging data of individual particles at both micro and nanoscales, offering considerable potential for label-free analysis of bio-particles and bio-molecules such as exosomes, viruses, and bacteria. However, the manual analysis of acquired images remains a challenge, particularly when dealing with dense samples or strong background noise, common in practical measurements. Manual analysis is not only prone to errors but is also time-consuming, especially when handling a large volume of experimental images. Currently, automated methods for sensing and analysis of such data are lacking. In this paper, we develop an accelerated approach for surface plasmon microscopy imaging of individual particles based on combining the interference scattering model of single particle and deep learning processing. We create hybrid datasets by combining the theoretical simulation of particle images with the actual measurements. Subsequently, we construct a neural network utilizing the EfficientNet architecture. Our results demonstrate the effectiveness of this novel deep learning technique in classifying interferometric scattering images and identifying multiple particles under noisy conditions. This advancement paves the way for practical bio-applications through efficient automated particle analysis.

摘要

表面等离子体显微镜被证明是一种强大的工具,可以捕获单个粒子在微观和纳米尺度上的干涉散射成像数据,为生物粒子和生物分子(如外泌体、病毒和细菌)的无标记分析提供了巨大的潜力。然而,获取图像的手动分析仍然是一个挑战,特别是在处理密集样本或强背景噪声时,这在实际测量中很常见。手动分析不仅容易出错,而且非常耗时,尤其是在处理大量实验图像时。目前,缺乏用于此类数据的自动传感和分析方法。在本文中,我们基于将单个粒子的干涉散射模型与深度学习处理相结合,开发了一种用于单个粒子表面等离子体显微镜成像的加速方法。我们通过将粒子图像的理论模拟与实际测量相结合来创建混合数据集。随后,我们利用 EfficientNet 架构构建了一个神经网络。我们的结果表明,这种新的深度学习技术在嘈杂条件下对干涉散射图像进行分类和识别多个粒子的有效性。这一进展通过高效的自动粒子分析为实际的生物应用铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/e9dc4c187734/biosensors-14-00363-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/95992fdf4ea0/biosensors-14-00363-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/11e0ab12746a/biosensors-14-00363-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/4a17b4d11080/biosensors-14-00363-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/7b885507c6f0/biosensors-14-00363-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/c141c344109a/biosensors-14-00363-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/10f91f415947/biosensors-14-00363-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/3be2ed95226e/biosensors-14-00363-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/e9dc4c187734/biosensors-14-00363-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/95992fdf4ea0/biosensors-14-00363-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/11e0ab12746a/biosensors-14-00363-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/4a17b4d11080/biosensors-14-00363-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/7b885507c6f0/biosensors-14-00363-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/c141c344109a/biosensors-14-00363-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/10f91f415947/biosensors-14-00363-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/3be2ed95226e/biosensors-14-00363-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f09f/11353015/e9dc4c187734/biosensors-14-00363-g008.jpg

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本文引用的文献

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ACS Nano. 2024 Apr 2;18(13):9704-9712. doi: 10.1021/acsnano.4c01411. Epub 2024 Mar 21.
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Deep Learning-Based Culture-Free Bacteria Detection in Urine Using Large-Volume Microscopy.基于深度学习的大容量显微镜尿液无文化细菌检测。
Biosensors (Basel). 2024 Feb 5;14(2):89. doi: 10.3390/bios14020089.
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Recent Advances in Real-Time Label-Free Detection of Small Molecules.小分子实时无标记检测的最新进展
Biosensors (Basel). 2024 Feb 1;14(2):80. doi: 10.3390/bios14020080.
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Label-Free Optical Imaging of Nanoscale Single Entities.无标记光学成像纳米级单个体。
ACS Sens. 2024 Feb 23;9(2):543-554. doi: 10.1021/acssensors.3c02526. Epub 2024 Feb 12.
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Optical Biosensors for the Diagnosis of COVID-19 and Other Viruses-A Review.用于诊断新冠病毒及其他病毒的光学生物传感器——综述
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The Employment of the Surface Plasmon Resonance (SPR) Microscopy Sensor for the Detection of Individual Extracellular Vesicles and Non-Biological Nanoparticles.表面等离子体共振(SPR)显微镜传感器在检测个体细胞外囊泡和非生物纳米粒子中的应用。
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