College of Animal Science & Technology, Chongqing Three Gouges Vocational College, Chongqing 404100, China.
College of Veterinary Medicine, Northwest A & F University, Xianyang 712000, China.
Viruses. 2024 Jul 31;16(8):1229. doi: 10.3390/v16081229.
The objective of this study was to elucidate the mechanism of action of the active components of against porcine epidemic diarrhea and to provide a theoretical foundation for further development of novel anti-PED therapeutic agents based on . The potential targets of against PEDV were identified through a comprehensive literature review and analysis using the TCMSP pharmacological database, SwissDrugDesign database, GeneCards database, and UniProt database. Subsequently, the STRING database and Cytoscape 3.7.1 software were employed to construct a protein-protein interaction (PPI) network and screen key targets. Gene Ontology (GO) function and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis were conducted on the identified targets. Molecular docking studies were performed using AutoDock 1.5.7 software to analyze the binding energy and modes of interaction between the active components of and the target proteins. The PyMOL 2.5.0a0 software was employed to visualize the docking results. Through comprehensive analysis, 74 specific targets of active components of against PEDV were identified. The core gene targets were screened, and an interaction network diagram was subsequently generated. Ultimately, 14 core targets were identified, with STAT3, ESR1, CASP3, and SRC exhibiting the most significant interactions. GO enrichment analysis revealed a total of 215 molecular items, including 48 biological function items, 139 biological process items, and 28 cellular component items. KEGG enrichment analysis identified 140 signaling pathways. Molecular docking analysis demonstrated that epiberberine and palmatine exhibited high binding affinity with STAT3 protein, worenine showed high binding affinity with ESR1 protein, obacunone exhibited high binding affinity with CASP3 protein, and epiberberine, obacunone, berberine, and berberruine exhibited high binding affinity with SRC protein. A network pharmacology and molecular docking technology approach was employed to screen six important active components of and four important potential targets against PEDV infection. The findings indicated that the active components of could serve as promising pharmaceutical agents for the prevention and control of PEDV, with significant potential for clinical application.
本研究旨在阐明[药物名称]有效成分抗猪流行性腹泻的作用机制,为进一步开发基于[药物名称]的新型抗 PED 治疗药物提供理论基础。通过全面的文献回顾,并利用 TCMSP 药理学数据库、SwissDrugDesign 数据库、GeneCards 数据库和 UniProt 数据库进行分析,确定了[药物名称]针对 PEDV 的潜在靶点。随后,利用 STRING 数据库和 Cytoscape 3.7.1 软件构建蛋白质-蛋白质相互作用(PPI)网络,并筛选关键靶点。对鉴定出的靶点进行基因本体(GO)功能和京都基因与基因组百科全书(KEGG)通路富集分析。利用 AutoDock 1.5.7 软件进行分子对接研究,分析[药物名称]有效成分与靶蛋白的结合能和相互作用模式。利用 PyMOL 2.5.0a0 软件对对接结果进行可视化。通过综合分析,鉴定出[药物名称]有效成分抗 PEDV 的 74 个特定靶点。筛选核心基因靶标,生成相互作用网络图。最终,确定了 14 个核心靶点,其中 STAT3、ESR1、CASP3 和 SRC 表现出最显著的相互作用。GO 富集分析共涉及 215 个分子项目,包括 48 个生物功能项目、139 个生物过程项目和 28 个细胞成分项目。KEGG 富集分析鉴定出 140 个信号通路。分子对接分析表明,小檗碱和黄连碱与 STAT3 蛋白具有较高的结合亲和力,吴茱萸新碱与 ESR1 蛋白具有较高的结合亲和力,莪术二酮与 CASP3 蛋白具有较高的结合亲和力,小檗碱、莪术二酮、黄连素和盐酸药根碱与 SRC 蛋白具有较高的结合亲和力。采用网络药理学和分子对接技术筛选[药物名称]的 6 种重要活性成分和 4 种抗 PEDV 感染的重要潜在靶点。研究结果表明,[药物名称]的活性成分可能成为预防和控制 PEDV 的有前途的药物,具有重要的临床应用潜力。