Institut Pasteur, Université de Paris Cité, CNRS UMR3525, Microbial Evolutionary Genomics, Paris, France.
PLoS Biol. 2024 Aug 29;22(8):e3002796. doi: 10.1371/journal.pbio.3002796. eCollection 2024 Aug.
Mobile genetic elements shape microbial gene repertoires and populations. Recent results reveal that many, possibly most, microbial mobile genetic elements require helpers to transfer between genomes, which we refer to as Hitcher Genetic Elements (hitchers or HGEs). They may be a large fraction of pathogenicity and resistance genomic islands, whose mechanisms of transfer have remained enigmatic for decades. Together with their helper elements and their bacterial hosts, hitchers form tripartite networks of interactions that evolve rapidly within a parasitism-mutualism continuum. In this emerging view of microbial genomes as communities of mobile genetic elements many questions arise. Which elements are being moved, by whom, and how? How often are hitchers costly hyper-parasites or beneficial mutualists? What is the evolutionary origin of hitchers? Are there key advantages associated with hitchers' lifestyle that justify their unexpected abundance? And why are hitchers systematically smaller than their helpers? In this essay, we start answering these questions and point ways ahead for understanding the principles, origin, mechanisms, and impact of hitchers in bacterial ecology and evolution.
移动遗传元件塑造了微生物的基因库和种群。最近的研究结果表明,许多(可能是大多数)微生物移动遗传元件在基因组之间转移需要辅助因子,我们称之为 Hitcher 遗传元件( Hitcher 或 HGE )。它们可能是致病性和耐药性基因组岛的重要组成部分,其转移机制几十年来一直是个谜。 Hitcher 与其辅助因子及其细菌宿主一起,形成了三方相互作用的网络,在寄生-共生连续体中迅速进化。在这种新兴的微生物基因组作为移动遗传元件群落的观点中,出现了许多问题。哪些元件正在被转移,由谁转移,以及如何转移? Hitcher 是经常成为代价高昂的超寄生虫还是有益的共生体? Hitcher 的进化起源是什么? Hitcher 的生活方式有哪些关键优势,使其如此丰富?为什么 Hitcher 比它们的辅助因子通常要小?在这篇文章中,我们开始回答这些问题,并指出理解 Hitcher 在细菌生态学和进化中的原理、起源、机制和影响的方向。