Shiekh Sajad, Feldt Darion, Jack Amanda, Kodikara Sineth G, Alfehaid Janan, Pasha Sabaha, Yildiz Ahmet, Balci Hamza
Department of Physics, Kent State University, Kent, OH 44242, USA.
Biophysics Graduate Group, University of California, Berkeley, CA 94720, USA.
bioRxiv. 2024 Aug 19:2024.08.18.608453. doi: 10.1101/2024.08.18.608453.
Shelterin serves critical roles in suppressing superfluous DNA damage repair pathways on telomeres. The junction between double-stranded telomeric tracts (dsTEL) and single-stranded telomeric overhang (ssTEL) is the most accessible region of the telomeric DNA. The shelterin complex contains dsTEL and ssTEL binding proteins and can protect this junction by bridging between the ssTEL and dsTEL tracts. To test this possibility, we monitored shelterin binding to telomeric DNA substrates with varying ssTEL and dsTEL lengths and quantified its impact on telomere accessibility using single-molecule fluorescence microscopy methods . We identified the first dsTEL repeat nearest to the junction as the preferred binding site for creating the shelterin bridge. Shelterin requires at least two ssTEL repeats while the POT1 subunit of shelterin that binds to ssTEL requires longer ssTEL tracts for stable binding to telomeres and effective protection of the junction region. The ability of POT1 to protect the junction is significantly enhanced by the 5'-phosphate at the junction. Collectively, our results show that shelterin enhances the binding stability of POT1 to ssTEL and provides more effective protection compared to POT1 alone by bridging single- and double-stranded telomeric tracts.
端粒保护蛋白复合体(Shelterin)在抑制端粒上多余的DNA损伤修复途径中发挥着关键作用。双链端粒序列(dsTEL)与单链端粒悬突(ssTEL)之间的连接处是端粒DNA最易接近的区域。端粒保护蛋白复合体包含双链端粒序列和单链端粒悬突结合蛋白,并且可以通过在单链端粒悬突和双链端粒序列之间形成桥接来保护这个连接处。为了验证这种可能性,我们使用单分子荧光显微镜方法监测了端粒保护蛋白复合体与具有不同单链端粒悬突和双链端粒序列长度的端粒DNA底物的结合情况,并量化了其对端粒可及性的影响。我们确定了最靠近连接处的第一个双链端粒序列重复单元是形成端粒保护蛋白复合体桥接的首选结合位点。端粒保护蛋白复合体需要至少两个单链端粒序列重复单元,而端粒保护蛋白复合体中与单链端粒悬突结合的POT1亚基需要更长的单链端粒序列才能稳定结合到端粒并有效保护连接区域。连接处的5'-磷酸显著增强了POT1保护连接区域的能力。总体而言,我们的结果表明,端粒保护蛋白复合体增强了POT1与单链端粒悬突的结合稳定性,并且通过桥接单链和双链端粒序列,相比单独的POT1提供了更有效的保护。