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YAP 在整合素黏附中磷酸化:来自计算模型的见解。

YAP phosphorylation within integrin adhesions: Insights from a computational model.

机构信息

MERLN Institute for Technology-Inspired Regenerative Medicine, Department of Cell Biology-Inspired Tissue Engineering, Maastricht University, Maastricht, the Netherlands.

Department of Genetics and Developmental Biology, Rappaport Faculty of Medicine, Technion - Israel Institute of Technology, Haifa, Israel.

出版信息

Biophys J. 2024 Nov 5;123(21):3658-3668. doi: 10.1016/j.bpj.2024.09.002. Epub 2024 Sep 3.

Abstract

Mechanical and biochemical cues intricately activate Yes-associated protein (YAP), which is pivotal for the cellular responses to these stimuli. Recent findings reveal an unexplored role of YAP in influencing the apoptotic process. It has been shown that, on soft matrices, YAP is recruited to small adhesions, phosphorylated at Y357, and translocated into the nucleus triggering apoptosis. Interestingly, YAP Y357 phosphorylation is significantly reduced in larger mature focal adhesions on stiff matrices. Building upon these novel insights, we have developed a stochastic model to delve deeper into the complex dynamics of YAP phosphorylation within integrin adhesions. Our findings emphasize several key points: firstly, increasing the cytosolic diffusion rate of YAP correlates with higher levels of phosphorylated YAP (pYAP); secondly, increasing the number of binding sites and distributing them across the membrane surface, mimicking smaller adhesions, leads to higher pYAP levels, particularly at lower diffusion rates. Moreover, we show that the binding and release rate of YAP to adhesions as well as adhesion lifetimes significantly influence the size effect of adhesion-induced YAP phosphorylation. The results highlight the complex and dynamic interplay between adhesion lifetime, the rate of pYAP unbinding from adhesions, and dephosphorylation rates, collectively shaping overall pYAP levels. In summary, our work advances the understanding of YAP mechanotransduction and opens avenues for experimental validation.

摘要

机械和生化线索错综复杂地激活了 Yes 相关蛋白 (YAP),这对于细胞对这些刺激的反应至关重要。最近的发现揭示了 YAP 在影响细胞凋亡过程中的一个未被探索的作用。研究表明,在柔软的基质上,YAP 被募集到小黏附物中,在 Y357 处发生磷酸化,并易位到细胞核中,引发细胞凋亡。有趣的是,在坚硬基质上较大的成熟焦点黏附中,YAP Y357 的磷酸化显著减少。基于这些新的发现,我们开发了一个随机模型,深入研究了整合素黏附中 YAP 磷酸化的复杂动力学。我们的研究结果强调了几个关键点:首先,增加 YAP 的细胞质扩散率与更高水平的磷酸化 YAP(pYAP)相关;其次,增加结合位点的数量并将其分布在膜表面上,模拟更小的黏附物,可导致更高水平的 pYAP,尤其是在扩散率较低的情况下。此外,我们表明 YAP 与黏附物的结合和释放速率以及黏附物的寿命显著影响黏附诱导的 YAP 磷酸化的尺寸效应。研究结果突出了黏附物寿命、pYAP 从黏附物上解结合的速率以及去磷酸化速率之间的复杂和动态相互作用,共同塑造了整体的 pYAP 水平。总之,我们的工作推进了对 YAP 机械转导的理解,并为实验验证开辟了途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc19/11560305/5f6d6e0ce4a4/gr1.jpg

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