• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于全基因组鉴定、分析与表达的紫菀木 TIFY 转录因子研究

Genome-wide investigation of the TIFY transcription factors in alfalfa (Medicago sativa L.): identification, analysis, and expression.

机构信息

Technology Engineering Center of Drought and Cold-Resistant Grass Breeding in North of the National Forestry and Grassland Administration, College of Grassland, Resources and Environment, Inner Mongolia Agricultural University, Hohhot, China.

Key Laboratory of Grassland Resources of the Ministry of Education, College of Grassland, Resources and Environment, Inner Mongolia Agricultural University, Hohhot, China.

出版信息

BMC Plant Biol. 2024 Sep 6;24(1):840. doi: 10.1186/s12870-024-05378-w.

DOI:10.1186/s12870-024-05378-w
PMID:39242996
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11378388/
Abstract

BACKGROUND

Alfalfa (Medicago sativa L.) is an essential leguminous forage with high nutrition and strong adaptability. The TIFY family is a plant-specific transcription factor identified in many plants. However, few reports have been reported on the phylogenetic analysis and gene expression profiling of TIFY family genes in alfalfa.

RESULT

A total of 84 TIFY genes belonging to 4 categories were identified in alfalfa, including 58 MsJAZs, 18 MsZMLs, 4 MsTIFYs and 4 MsPPDs, respectively. qRT-PCR data from 8 genes in different tissues revealed that most MsTIFY genes were highly expressed in roots. The expression of MsTIFY14 was up-regulated after different times in both thrips-resistant and susceptible alfalfa after thrips feeding, and the expression of the remaining MsTIFYs had a strong correlation with the time of thrips feeding. Different abiotic stresses, including drought, salt, and cold, could induce or inhibit the expression of MsTIFY genes to varying degrees. In addition, the eight genes were all significantly up-regulated by JA and/or SA. Interestingly, MsTIFY77 was induced considerably by all the biotic, abiotic, or plant hormones (JA or SA) except ABA.

CONCLUSION

Our study identified members of the TIFY gene family in alfalfa and analyzed their structures and possible functions. It laid the foundation for further research on the molecular functions of TIFYs in alfalfa.

摘要

背景

紫花苜蓿(Medicago sativa L.)是一种重要的豆科饲用植物,具有高营养价值和强适应性。TIFY 家族是在许多植物中发现的一种植物特异性转录因子。然而,关于苜蓿 TIFY 家族基因的系统发育分析和基因表达谱的报道较少。

结果

在苜蓿中鉴定出 84 个 TIFY 基因,分为 4 类,包括 58 个 MsJAZs、18 个 MsZMLs、4 个 MsTIFYs 和 4 个 MsPPDs。8 个基因在不同组织中的 qRT-PCR 数据显示,大多数 MsTIFY 基因在根中高度表达。在受到蓟马侵害和易感苜蓿后不同时间的蓟马取食后,MsTIFY14 的表达上调,其余 MsTIFYs 的表达与蓟马取食时间密切相关。不同的非生物胁迫,包括干旱、盐和寒冷,可不同程度地诱导或抑制 MsTIFY 基因的表达。此外,这 8 个基因都被 JA 和/或 SA 显著上调。有趣的是,除了 ABA 外,MsTIFY77 被所有生物、非生物或植物激素(JA 或 SA)显著诱导。

结论

本研究鉴定了苜蓿 TIFY 基因家族的成员,并分析了它们的结构和可能的功能。为进一步研究 TIFYs 在苜蓿中的分子功能奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/494c9fb3d499/12870_2024_5378_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/7979abd55942/12870_2024_5378_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/860a02eb4d00/12870_2024_5378_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/219780e17cf6/12870_2024_5378_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/d5033eda1d01/12870_2024_5378_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/7bccf5d0847d/12870_2024_5378_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/b356e9b87011/12870_2024_5378_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/42fbd9fd3cf6/12870_2024_5378_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/494c9fb3d499/12870_2024_5378_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/7979abd55942/12870_2024_5378_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/860a02eb4d00/12870_2024_5378_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/219780e17cf6/12870_2024_5378_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/d5033eda1d01/12870_2024_5378_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/7bccf5d0847d/12870_2024_5378_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/b356e9b87011/12870_2024_5378_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/42fbd9fd3cf6/12870_2024_5378_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c33/11378388/494c9fb3d499/12870_2024_5378_Fig8_HTML.jpg

相似文献

1
Genome-wide investigation of the TIFY transcription factors in alfalfa (Medicago sativa L.): identification, analysis, and expression.基于全基因组鉴定、分析与表达的紫菀木 TIFY 转录因子研究
BMC Plant Biol. 2024 Sep 6;24(1):840. doi: 10.1186/s12870-024-05378-w.
2
Genome-wide identification and expression pattern analysis of the Aux/IAA (auxin/indole-3-acetic acid) gene family in alfalfa (Medicago sativa) and the potential functions under drought stress.苜蓿(Medicago sativa)Aux/IAA(生长素/吲哚-3-乙酸)基因家族的全基因组鉴定和表达模式分析及其在干旱胁迫下的潜在功能。
BMC Genomics. 2024 Apr 18;25(1):382. doi: 10.1186/s12864-024-10313-2.
3
Genome-wide identification of the MADS-box transcription factor family in autotetraploid cultivated alfalfa (Medicago sativa L.) and expression analysis under abiotic stress.全基因组鉴定同源四倍体栽培紫花苜蓿(Medicago sativa L.)中的 MADS 框转录因子家族,并在非生物胁迫下进行表达分析。
BMC Genomics. 2021 Aug 7;22(1):603. doi: 10.1186/s12864-021-07911-9.
4
In silico analysis identified bZIP transcription factors genes responsive to abiotic stress in Alfalfa (Medicago sativa L.).计算机分析鉴定出了响应紫花苜蓿(Medicago sativa L.)非生物胁迫的 bZIP 转录因子基因。
BMC Genomics. 2024 May 21;25(1):497. doi: 10.1186/s12864-024-10277-3.
5
Genome-Wide Identification and Analysis of the NF-Y Transcription Factor Family Reveal Its Potential Roles in Salt Stress in Alfalfa ( L.).全基因组鉴定和分析 NF-Y 转录因子家族揭示其在苜蓿盐胁迫中的潜在作用。
Int J Mol Sci. 2022 Jun 8;23(12):6426. doi: 10.3390/ijms23126426.
6
Genome-wide investigation of the PIF gene family in alfalfa (Medicago sativa L.) expression profiles during development and stress.蒺藜苜蓿(Medicago sativa L.)中 PIF 基因家族的全基因组研究及其在发育和胁迫过程中的表达谱。
BMC Genom Data. 2024 Sep 2;25(1):79. doi: 10.1186/s12863-024-01264-4.
7
Genome-Wide Identification of GRAS Gene Family and Their Responses to Abiotic Stress in .全基因组鉴定. 中的 GRAS 基因家族及其对非生物胁迫的响应
Int J Mol Sci. 2021 Jul 20;22(14):7729. doi: 10.3390/ijms22147729.
8
Genome-wide identification of SHMT family genes in alfalfa (Medicago sativa) and its functional analyses under various abiotic stresses.苜蓿(Medicago sativa)SHMT 家族基因的全基因组鉴定及其在各种非生物胁迫下的功能分析。
BMC Genomics. 2024 Aug 12;25(1):781. doi: 10.1186/s12864-024-10637-z.
9
Genome-Wide Identification and Expression Analysis of the Gene Family in Alfalfa Revealed Its Potential Roles in Response to Multiple Abiotic Stresses.基于蒺藜苜蓿全基因组鉴定和表达分析揭示了其在响应多种非生物胁迫中的潜在作用。
Int J Mol Sci. 2022 Sep 2;23(17):10015. doi: 10.3390/ijms231710015.
10
Genome-Wide Identification and Expression Profiling of the Gene Family in L. Under Various Abiotic Stresses.在各种非生物胁迫下鉴定和表达 L. 基因家族的全基因组。
DNA Cell Biol. 2019 Oct;38(10):1056-1068. doi: 10.1089/dna.2019.4881. Epub 2019 Aug 12.

本文引用的文献

1
Exogenous application of salicylic acid improves freezing stress tolerance in alfalfa.外源施加水杨酸可提高苜蓿的抗冻胁迫能力。
Front Plant Sci. 2023 Mar 9;14:1091077. doi: 10.3389/fpls.2023.1091077. eCollection 2023.
2
Genome-wide identification of the TIFY family reveals JAZ subfamily function in response to hormone treatment in Betula platyphylla.全基因组鉴定 TIFY 家族揭示了 JAZ 亚家族在银桦响应激素处理中的功能。
BMC Plant Biol. 2023 Mar 15;23(1):143. doi: 10.1186/s12870-023-04138-6.
3
The Non-JAZ TIFY Protein TIFY8 of Interacts with the HD-ZIP III Transcription Factor REVOLUTA and Regulates Leaf Senescence.
非 JAZ TIFY 蛋白 TIFY8 与 HD-ZIP III 转录因子 REVOLUTA 互作并调控叶片衰老。
Int J Mol Sci. 2023 Feb 4;24(4):3079. doi: 10.3390/ijms24043079.
4
DOF transcription factors: Specific regulators of plant biological processes.DOF转录因子:植物生物学过程的特定调节因子。
Front Plant Sci. 2023 Jan 20;14:1044918. doi: 10.3389/fpls.2023.1044918. eCollection 2023.
5
Identification of Alfalfa SPL gene family and expression analysis under biotic and abiotic stresses.鉴定紫花苜蓿 SPL 基因家族及其在生物和非生物胁迫下的表达分析。
Sci Rep. 2023 Jan 3;13(1):84. doi: 10.1038/s41598-022-26911-7.
6
HN-PPISP: a hybrid network based on MLP-Mixer for protein-protein interaction site prediction.HN-PPISP:一种基于MLP-Mixer的用于蛋白质-蛋白质相互作用位点预测的混合网络。
Brief Bioinform. 2023 Jan 19;24(1). doi: 10.1093/bib/bbac480.
7
Transcription factor is not just a transcription factor.转录因子不只是转录因子。
Trends Plant Sci. 2022 Nov;27(11):1087-1089. doi: 10.1016/j.tplants.2022.08.001. Epub 2022 Aug 16.
8
Binding of the transcription activator-like effector augments transcriptional regulation by another transcription factor.转录激活子样效应因子的结合增强了另一个转录因子的转录调控。
Nucleic Acids Res. 2022 Jun 24;50(11):6562-6574. doi: 10.1093/nar/gkac454.
9
Genome-Wide Analysis of the Soybean TIFY Family and Identification of and Response to Salt Stress.大豆TIFY家族的全基因组分析及其对盐胁迫的响应鉴定
Front Plant Sci. 2022 Mar 23;13:845314. doi: 10.3389/fpls.2022.845314. eCollection 2022.
10
Genome-wide identification and characterization of the TIFY gene family in kiwifruit.猕猴桃 TIFY 基因家族的全基因组鉴定和特征分析。
BMC Genomics. 2022 Mar 5;23(1):179. doi: 10.1186/s12864-022-08398-8.