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3-(2-氯乙酰基)-2,4,6,8-四苯基-3,7-二氮杂双环-[3.3.1]壬烷-9-酮的晶体结构、 Hirshfeld表面分析、密度泛函理论及分子对接研究

Crystal structure, Hirshfeld surface analysis, DFT and the mol-ecular docking studies of 3-(2-chloro-acet-yl)-2,4,6,8-tetra-phenyl-3,7-di-azabicyclo-[3.3.1]nonan-9-one.

作者信息

Divyabharathi Sivagnanam, Karthiga Anjalai Ramachandran, Shalo Rajans Reshwen, Rajeswari Krishnan, Vidhyasagar Thankakan, Selvanayagam Sivashanmugam

机构信息

Department of Chemistry Annamalai University, Annamalainagar Chidambaram 608 002 India.

PG & Research Department of Chemistry, Government Arts College, Chidambaram 608 102, India.

出版信息

Acta Crystallogr E Crystallogr Commun. 2024 Aug 30;80(Pt 9):981-985. doi: 10.1107/S2056989024008302. eCollection 2024 Sep 1.

Abstract

In the title compound, CHClNO, the two piperidine rings of the di-aza-bicyclo moiety adopt distorted-chair conformations. Inter-molecular C-H⋯π inter-actions are mainly responsible for the crystal packing. The inter-molecular inter-actions were qu-anti-fied and analysed using Hirshfeld surface analysis, revealing that H⋯H inter-actions contribute most to the crystal packing (52.3%). The mol-ecular structure was further optimized by density functional theory (DFT) at the B3LYP/6-31 G(d,p) level and is compared with the experimentally determined mol-ecular structure in the solid state.

摘要

在标题化合物CHClNO中,二氮杂双环部分的两个哌啶环呈扭曲椅式构象。分子间C-H⋯π相互作用是晶体堆积的主要原因。使用 Hirshfeld 表面分析对分子间相互作用进行了量化和分析,结果表明H⋯H相互作用对晶体堆积的贡献最大(52.3%)。通过密度泛函理论(DFT)在B3LYP/6-31 G(d,p)水平上进一步优化了分子结构,并与固态下实验测定的分子结构进行了比较。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d79/11389677/0ab75a9e23e4/e-80-00981-fig1.jpg

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