一种用于肌萎缩侧索硬化症的微小RNA诊断生物标志物。

A microRNA diagnostic biomarker for amyotrophic lateral sclerosis.

作者信息

Banack Sandra Anne, Dunlop Rachael A, Mehta Paul, Mitsumoto Hiroshi, Wood Stewart P, Han Moon, Cox Paul Alan

机构信息

Brain Chemistry Labs, Jackson, WY 83001, USA.

Office of Innovation and Analytics, Agency for Toxic Substances and Disease Registry, Centers for Disease Control and Prevention, Atlanta, GA 30033, USA.

出版信息

Brain Commun. 2024 Sep 13;6(5):fcae268. doi: 10.1093/braincomms/fcae268. eCollection 2024.

Abstract

Blood-based diagnostic biomarkers for amyotrophic lateral sclerosis will improve patient outcomes and positively impact novel drug development. Critical to the development of such biomarkers is robust method validation, optimization and replication with adequate sample sizes and neurological disease comparative blood samples. We sought to test an amyotrophic lateral sclerosis biomarker derived from diverse samples to determine if it is disease specific. Extracellular vesicles were extracted from blood plasma obtained from individuals diagnosed with amyotrophic lateral sclerosis, primary lateral sclerosis, Parkinson's disease and healthy controls. Immunoaffinity purification was used to create a neural-enriched extracellular vesicle fraction. MicroRNAs were measured across sample cohorts using real-time polymerase chain reaction. A Kruskal-Wallis test was used to assess differences in plasma microRNAs followed by Mann-Whitney tests to compare disease groups. Diagnostic accuracy was determined using a machine learning algorithm and a logistic regression model. We identified an eight-microRNA diagnostic signature for blood samples from amyotrophic lateral sclerosis patients with high sensitivity and specificity and an area under the curve calculation of 98% with clear statistical separation from neurological controls. The eight identified microRNAs represent disease-related biological processes consistent with amyotrophic lateral sclerosis. The direction and magnitude of gene fold regulation are consistent across four separate patient cohorts with real-time polymerase chain reaction analyses conducted in two laboratories from diverse samples and sample collection procedures. We propose that this diagnostic signature could be an aid to neurologists to supplement current clinical metrics used to diagnose amyotrophic lateral sclerosis.

摘要

用于肌萎缩侧索硬化症的血液诊断生物标志物将改善患者预后,并对新型药物研发产生积极影响。此类生物标志物研发的关键在于进行有力的方法验证、优化以及在足够样本量和神经疾病对照血液样本的情况下进行复制。我们试图测试一种源自多种样本的肌萎缩侧索硬化症生物标志物,以确定其是否具有疾病特异性。从被诊断患有肌萎缩侧索硬化症、原发性侧索硬化症、帕金森病的个体以及健康对照者的血浆中提取细胞外囊泡。采用免疫亲和纯化法制备富含神经细胞外囊泡组分。使用实时聚合酶链反应在各样本队列中检测微小RNA。采用Kruskal-Wallis检验评估血浆微小RNA的差异,随后采用Mann-Whitney检验比较疾病组。使用机器学习算法和逻辑回归模型确定诊断准确性。我们为肌萎缩侧索硬化症患者的血液样本确定了一种具有高灵敏度和特异性的八微小RNA诊断特征,曲线下面积计算为98%,与神经疾病对照有明显的统计学差异。所确定的八种微小RNA代表了与肌萎缩侧索硬化症一致的疾病相关生物学过程。在两个实验室对来自不同样本和样本采集程序的四个独立患者队列进行实时聚合酶链反应分析,基因折叠调控的方向和幅度是一致的。我们认为这种诊断特征可帮助神经科医生补充当前用于诊断肌萎缩侧索硬化症的临床指标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50e3/11398878/77d489595457/fcae268_ga.jpg

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