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从血培养中分离出的耐碳青霉烯类新种的鉴定与特征分析。

Identification and characterisation of carbapenem-resistant sp. nov. isolated from blood culture.

作者信息

Rønning Torunn Gresdal, Olaisen Camilla, Ås Christina Gabrielsen, Afset Jan Egil, Haugan Maria Schei

机构信息

Department of Medical Microbiology, St. Olavs Hospital, Trondheim University Hospital, Trondheim, Norway.

Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.

出版信息

New Microbes New Infect. 2024 Aug 27;62:101473. doi: 10.1016/j.nmni.2024.101473. eCollection 2024 Dec.

Abstract

BACKGROUND

This study aimed to investigate a highly resistant strain of sp. isolated from a patient with bloodstream infection and determine its taxonomic classification.

METHODS

The strain was isolated from blood culture from a 65-year-old male patient admitted to St. Olavs University hospital, Trondheim, Norway, in 2023. Antimicrobial susceptibility testing as well as phenotypic and biochemical characterization were performed. Whole genome sequencing was conducted and genomic comparison to type strains was carried out.

RESULTS

The strain was initially identified as / but showed significant genetic differences, suggesting that it belonged to an undescribed species within the genus. Phenotypic and biochemical characterization identified the strain as a non-motile, facultative anaerobic bacterium with α-hemolysis. Antimicrobial susceptibility testing showed resistance to all beta-lactams tested. Genomic analyses confirmed the classification of the strain as a novel species, which was designated .

CONCLUSION

This study combines conventional phenotypic tests with whole genome sequencing for accurate taxonomic classification of a bacterial strain isolated from blood culture. The identification of a novel species within the genus contributes to the understanding of microbial diversity and antibiotic resistance of the genus in clinical settings.

摘要

背景

本研究旨在调查从一名血流感染患者分离出的高度耐药的 菌株,并确定其分类地位。

方法

该菌株于2023年从挪威特隆赫姆市圣奥拉夫大学医院收治的一名65岁男性患者的血培养物中分离得到。进行了药敏试验以及表型和生化特征分析。进行了全基因组测序,并与模式菌株进行了基因组比较。

结果

该菌株最初被鉴定为 / ,但显示出显著的遗传差异,表明它属于 属内一个未描述的物种。表型和生化特征分析确定该菌株为无动力、兼性厌氧的α溶血细菌。药敏试验显示对所有测试的β-内酰胺类药物耐药。基因组分析证实该菌株分类为一个新物种,命名为 。

结论

本研究将传统表型试验与全基因组测序相结合,对从血培养物中分离出的细菌菌株进行准确的分类。在 属内鉴定出一个新物种有助于了解临床环境中 属的微生物多样性和抗生素耐药性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29f0/11401357/560a42485dd4/gr1.jpg

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