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从高分子物理学的角度解读FG核孔蛋白的内在无序特征。

Deciphering the intrinsically disordered characteristics of the FG-Nups through the lens of polymer physics.

作者信息

Matsuda Atsushi, Mansour Abdullah, Mofrad Mohammad R K

机构信息

Molecular Cell Biomechanics Laboratory, Departments of Bioengineering and Mechanical Engineering, University of California Berkeley, Berkeley, CA, USA.

Molecular Biophysics and Integrative Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.

出版信息

Nucleus. 2024 Dec;15(1):2399247. doi: 10.1080/19491034.2024.2399247. Epub 2024 Sep 16.

Abstract

The nuclear pore complex (NPC) is a critical gateway regulating molecular transport between the nucleus and cytoplasm. It allows small molecules to pass freely, while larger molecules require nuclear transport receptors to traverse the barrier. This selective permeability is maintained by phenylalanine-glycine-rich nucleoporins (FG-Nups), intrinsically disordered proteins that fill the NPC's central channel. The disordered and flexible nature of FG-Nups complicates their spatial characterization with conventional structural biology techniques. To address this challenge, polymer physics offers a valuable framework for describing FG-Nup behavior, reducing their complex structures to a few key parameters. In this review, we explore how polymer physics models FG-Nups using these parameters and discuss experimental efforts to quantify them in various contexts, providing insights into the conformational properties of FG-Nups.

摘要

核孔复合体(NPC)是调节细胞核与细胞质之间分子运输的关键通道。它允许小分子自由通过,而较大的分子则需要核运输受体才能穿越屏障。这种选择性通透性由富含苯丙氨酸-甘氨酸的核孔蛋白(FG-Nups)维持,这些内在无序的蛋白质填充了NPC的中央通道。FG-Nups的无序和灵活性质使得用传统结构生物学技术对其进行空间表征变得复杂。为应对这一挑战,聚合物物理学提供了一个有价值的框架来描述FG-Nup的行为,将其复杂结构简化为几个关键参数。在本综述中,我们探讨聚合物物理学如何使用这些参数对FG-Nups进行建模,并讨论在各种情况下对其进行量化的实验努力,从而深入了解FG-Nups的构象性质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4685/11407397/3b50d8dfeee1/KNCL_A_2399247_F0001_OC.jpg

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