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基因组数据描绘了密歇根州入侵性红沼泽螯虾的繁殖生态模式。

Genomic Data Characterize Reproductive Ecology Patterns in Michigan Invasive Red Swamp Crayfish ().

作者信息

Adams Nicole E, Homola Jared J, Sard Nicholas M, Nathan Lucas R, Roth Brian M, Robinson John D, Scribner Kim T

机构信息

Department of Fisheries and Wildlife Michigan State University East Lansing Michigan USA.

U.S. Geological Survey, Wisconsin Cooperative Fishery Research Unit, College of Natural Resources University of Wisconsin-Stevens Point Stevens Point Wisconsin USA.

出版信息

Evol Appl. 2024 Sep 15;17(9):e70007. doi: 10.1111/eva.70007. eCollection 2024 Sep.

DOI:10.1111/eva.70007
PMID:39286761
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11403126/
Abstract

The establishment and spread of invasive species are directly related to intersexual interactions as dispersal and reproductive success are related to distribution, effective population size, and population growth. Accordingly, populations established by r-selected species are particularly difficult to suppress or eradicate. One such species, the red swamp crayfish () is established globally at considerable ecological and financial costs to natural and human communities. Here, we develop a single nucleotide polymorphism (SNP) loci panel for using restriction-associated DNA-sequencing data. We use the SNP panel to successfully genotype 1800 individuals at 930 SNPs in southeastern Michigan, USA. Genotypic data were used to reconstruct pedigrees, which enabled the characterization of mating system and statistical tests for associations among environmental, demographic, and phenotypic predictors and adult reproductive success estimates. We identified juvenile cohorts using genotype-based pedigrees, body size, and sampling timing, which elucidated the breeding phenology of multiple introduced populations. We report a high prevalence of multiple paternity in each surveyed waterbody, indicating polyandry in this species. We highlight the use of newly developed rapid genomic assessment tools for monitoring population reproductive responses, effective population sizes, and dispersal during ongoing control efforts.

摘要

入侵物种的建立和扩散与两性间相互作用直接相关,因为扩散和繁殖成功与分布、有效种群大小及种群增长有关。因此,由r选择物种建立的种群特别难以抑制或根除。一种这样的物种,即克氏原螯虾(Procambarus clarkii),已在全球范围内定殖,给自然和人类群落带来了巨大的生态和经济代价。在此,我们利用限制性内切酶相关DNA测序数据为克氏原螯虾开发了一个单核苷酸多态性(SNP)位点面板。我们使用该SNP面板成功地对美国密歇根州东南部1,800个个体的930个SNP进行了基因分型。基因型数据用于重建谱系,这使得能够表征交配系统,并对环境、人口统计学和表型预测因子与成体繁殖成功估计值之间的关联进行统计检验。我们利用基于基因型的谱系、体型和采样时间确定了幼体群组,这阐明了多个引入种群的繁殖物候。我们报告在每个被调查水体中多父现象的发生率很高,表明该物种存在一妻多夫制。我们强调使用新开发的快速基因组评估工具来监测正在进行的控制工作期间的种群繁殖反应、有效种群大小和扩散情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/a3e470231344/EVA-17-e70007-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/ceb3ba1d6ead/EVA-17-e70007-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/6298d3e603c7/EVA-17-e70007-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/7f4466d1141c/EVA-17-e70007-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/41b7a78c7d4d/EVA-17-e70007-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/a3e470231344/EVA-17-e70007-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/ceb3ba1d6ead/EVA-17-e70007-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/6298d3e603c7/EVA-17-e70007-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/7f4466d1141c/EVA-17-e70007-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/41b7a78c7d4d/EVA-17-e70007-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a763/11403126/a3e470231344/EVA-17-e70007-g002.jpg

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本文引用的文献

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评估近亲标记重捕法作为一种用于极度濒危的板鳃亚纲动物种群的种群统计学建模工具的适用性。
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Pedigree analysis and estimates of effective breeding size characterize sea lamprey reproductive biology.谱系分析和有效繁殖规模估计描绘了海七鳃鳗的生殖生物学特征。
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A chromosome-level reference genome of red swamp crayfish Procambarus clarkii provides insights into the gene families regarding growth or development in crustaceans.克氏原螯虾的染色体水平参考基因组为研究甲壳类动物生长或发育相关基因家族提供了见解。
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