Department of Biology, Georgia State University, Atlanta, Georgia, USA.
Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, USA.
Appl Environ Microbiol. 2024 Oct 23;90(10):e0085624. doi: 10.1128/aem.00856-24. Epub 2024 Sep 17.
Benzene is a widespread groundwater contaminant that persists under anoxic conditions. The aim of this study was to more accurately investigate anaerobic microbial degradation pathways to predict benzene fate and transport. Preliminary genomic analysis of strain FRC-32, isolated from contaminated groundwater, revealed the presence of putative aromatic-degrading genes. was subsequently shown to conserve energy for growth on benzene as the sole electron donor and fumarate or nitrate as the electron acceptor. The gene, encoding for 3-hydroxybenzylsuccinate synthase (Hbs), a homolog of the radical-forming, toluene-activating benzylsuccinate synthase (Bss), was upregulated during benzene oxidation in , while the gene was upregulated during toluene oxidation. Addition of benzene to the whole-cell lysate resulted in toluene formation, indicating that methylation of benzene was occurring. Complementation of σ (deficient) transformed with the operon restored its ability to grow in the presence of toluene, revealing to be regulated by σ. Binding sites for σ and the transition state regulator AbrB were identified in the promoter region of the σ-encoding gene and binding was confirmed. Induced expression of during benzene and toluene degradation caused cultures to transition to the death phase. Our results suggested that can anaerobically oxidize benzene by methylation, which is regulated by σ and AbrB. Our findings further indicated that the benzene, toluene, and benzoate degradation pathways converge into a single metabolic pathway, representing a uniquely efficient approach to anaerobic aromatic degradation in .
The contamination of anaerobic subsurface environments including groundwater with toxic aromatic hydrocarbons, specifically benzene, toluene, ethylbenzene, and xylene, has become a global issue. Subsurface groundwater is largely anoxic, and further study is needed to understand the natural attenuation of these compounds. This study elucidated a metabolic pathway utilized by the bacterium capable of anaerobically degrading the recalcitrant molecule benzene using a unique activation mechanism involving methylation. The identification of aromatic-degrading genes and AbrB as a regulator of the anaerobic benzene and toluene degradation pathways provides insights into the mechanisms employed by to modulate metabolic pathways as necessary to thrive in anoxic contaminated groundwater. Our findings contribute to the understanding of novel anaerobic benzene degradation pathways that could potentially be harnessed to develop improved strategies for bioremediation of groundwater contaminants.
苯是一种广泛存在于地下水中的污染物,在缺氧条件下能持续存在。本研究的目的是更准确地研究厌氧微生物降解途径,以预测苯的命运和迁移。从污染地下水中分离出的菌株 FRC-32 的初步基因组分析显示存在假定的芳香族降解基因。研究表明, 可以将苯作为唯一的电子供体和延胡索酸盐或硝酸盐作为电子受体来保存生长所需的能量。在 中,编码 3-羟基苄基琥珀酸合酶(Hbs)的 基因被上调,该基因与形成自由基的甲苯激活的苄基琥珀酸合酶(Bss)同源,而在甲苯氧化过程中 基因被上调。将苯添加到 全细胞裂解物中会导致甲苯的形成,表明苯正在发生甲基化。用 操纵子转化的 σ(缺陷) ,恢复了其在甲苯存在下生长的能力,表明 受 σ 调控。在编码基因的启动子区域中鉴定出 σ 和过渡态调节剂 AbrB 的结合位点,并证实了结合。在苯和甲苯降解过程中诱导 的表达导致 培养物进入死亡阶段。我们的结果表明, 可以通过甲基化厌氧氧化苯,该过程受 σ 和 AbrB 调控。我们的发现进一步表明,苯、甲苯和苯甲酸降解途径汇聚到单一的代谢途径中,代表了一种在地下水中有效降解芳香族化合物的独特方法。
包括地下水在内的厌氧地下环境受到有毒芳香烃,特别是苯、甲苯、乙苯和二甲苯的污染,已成为一个全球性问题。地下水大部分处于缺氧状态,需要进一步研究以了解这些化合物的自然衰减情况。本研究阐明了一种由细菌 利用的代谢途径,该途径能够使用涉及甲基化的独特激活机制来厌氧降解顽固分子苯。鉴定芳香族降解基因和 AbrB 作为厌氧苯和甲苯降解途径的调节剂,为了解 调节代谢途径的机制提供了线索,这些机制是其在缺氧污染地下水中生存所必需的。我们的发现有助于理解新的厌氧苯降解途径,这可能为开发地下水污染物生物修复的改进策略提供帮助。