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转录组分析揭示了 Jakhrana 山羊乳腺泌乳动态的分子见解。

Transcriptomic analysis reveals molecular insights into lactation dynamics in Jakhrana goat mammary gland.

机构信息

Division of Animal Genetic Resources, ICAR- National Bureau of Animal Genetic Resources, Karnal, Haryana, 132001, India.

Division of Animal Biotechnology, ICAR-National Dairy Research Institute, Karnal, Haryana, 132001, India.

出版信息

BMC Genomics. 2024 Sep 18;25(1):874. doi: 10.1186/s12864-024-10744-x.

DOI:10.1186/s12864-024-10744-x
PMID:39294565
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11409665/
Abstract

BACKGROUND

Goat milk is gaining popularity as a superior alternative to bovine milk due to its closer resemblance to human milk. Understanding the molecular processes underlying lactation is crucial for improving milk quality and production in goats. However, the genetic mechanisms governing lactation in goats, particularly in indigenous breeds like the Jakhrana, remain largely unexplored.

RESULTS

In this study, we performed a comprehensive transcriptomic analysis of Jakhrana goat mammary glands during early and late lactation stages. We isolated milk somatic cells and conducted RNA sequencing, followed by transcript quantification and mapping against the ARS1.2 Capra hircus reference assembly. Our analysis identified differentially expressed genes (DEGs) and commonly expressed genes (CEGs) across the lactation phases. Early lactation showed enrichment of genes encoding antimicrobial peptides and lubrication proteins, while late lactation exhibited heightened expression of genes encoding major milk proteins. Additionally, DEG analysis revealed upregulation of pivotal genes, such as the ABC transporter gene MRP4, implicated in modulating milk composition and quality.

CONCLUSION

Our findings provide insights into the genetic mechanisms underlying lactation dynamics in the Jakhrana goat. Understanding these mechanisms could help in improving milk production and quality in goats, benefiting both the dairy industry and consumers.

摘要

背景

由于山羊奶更接近人类母乳,因此作为牛奶奶的替代品越来越受欢迎。了解泌乳背后的分子过程对于提高山羊奶的质量和产量至关重要。然而,控制山羊泌乳的遗传机制,特别是在 Jakhrana 等本土品种中,仍然在很大程度上未被探索。

结果

在这项研究中,我们对 Jakhrana 山羊乳腺在泌乳早期和晚期阶段进行了全面的转录组分析。我们分离了乳体细胞并进行了 RNA 测序,然后对 ARS1.2 Capra hircus 参考组装进行了转录定量和映射。我们的分析确定了在泌乳阶段差异表达的基因 (DEGs) 和共同表达的基因 (CEGs)。泌乳早期富含编码抗菌肽和润滑蛋白的基因,而泌乳晚期则表现出编码主要乳蛋白的基因表达增强。此外,差异表达基因分析显示,关键基因如 ABC 转运蛋白基因 MRP4 的上调,参与调节牛奶成分和质量。

结论

我们的研究结果提供了 Jakhrana 山羊泌乳动态的遗传机制的见解。了解这些机制有助于提高山羊的产奶量和质量,使奶制品行业和消费者都受益。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/ebb90f46aa46/12864_2024_10744_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/6018aaa485a7/12864_2024_10744_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/2de717dcfc09/12864_2024_10744_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/fba6947c717d/12864_2024_10744_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/560c690db227/12864_2024_10744_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/a6dae349b789/12864_2024_10744_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/ebb90f46aa46/12864_2024_10744_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/6018aaa485a7/12864_2024_10744_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/2de717dcfc09/12864_2024_10744_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/fba6947c717d/12864_2024_10744_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/560c690db227/12864_2024_10744_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/a6dae349b789/12864_2024_10744_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a0f5/11409665/ebb90f46aa46/12864_2024_10744_Fig6_HTML.jpg

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