• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

. 中基因家族的全基因组特征分析

Genome-Wide Characterization and Analysis of the Gene Family in .

作者信息

An Lijun, Ma Jiasi, Fan Chunjie, Li Huiling, Wu Aimin

机构信息

Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm College of Forestry and Landscape Architectures South China Agricultural University, Guangzhou 510642, China.

State Key Laboratory of Tree Genetics and Breeding Key Laboratory of State Forestry and Grassland Administration on Tropical Forestry Research Institute of Tropical Forestry Chinese Academy of Forestry, Guangzhou 510520, China.

出版信息

Int J Genomics. 2024 Sep 11;2024:2708223. doi: 10.1155/2024/2708223. eCollection 2024.

DOI:10.1155/2024/2708223
PMID:39295962
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11410410/
Abstract

SQUAMOSA promoter-binding protein-like () gene family, a group of plant-specific transcription factors, played crucial roles in regulating plant growth, development, signal transduction, and stress response. This study focuses on the gene family in the fast-growing , employing bioinformatics approaches to identify and analyze the gene physiochemical characteristics, conserved domains, structural composition, chromosomal distribution, phylogenetic relationships, cis-acting elements, and their expression patterns in various tissues and stress treatments. Twenty-three genes were identified in , which uneven distributed across seven chromosomes and classified into five groups. Prediction of cis-acting elements revealed that these genes might be related to light, hormone, and stress responses. Furthermore, and , mainly expressed in the stem apex and lateral branches, seem to be involved in hormone stress resistance. Our study provides insights into the potential functions of the genes in plant growth, stress response, and hormone transduction, offering valuable perspectives for subsequent research into their biological roles.

摘要

SQUAMOSA启动子结合蛋白样()基因家族是一组植物特有的转录因子,在调节植物生长、发育、信号转导和应激反应中发挥着关键作用。本研究聚焦于速生的基因家族,采用生物信息学方法来鉴定和分析该基因的理化特性、保守结构域、结构组成、染色体分布、系统发育关系、顺式作用元件及其在各种组织和应激处理中的表达模式。在中鉴定出23个基因,它们不均匀地分布在7条染色体上并分为5组。顺式作用元件预测表明这些基因可能与光、激素和应激反应有关。此外,和主要在茎尖和侧枝中表达,似乎参与激素应激抗性。我们的研究为基因在植物生长、应激反应和激素转导中的潜在功能提供了见解,为后续研究它们的生物学作用提供了有价值的观点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/00f9c48e959d/IJG2024-2708223.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/0a8aae43075d/IJG2024-2708223.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/f040952dbed3/IJG2024-2708223.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/1d912d0d7c42/IJG2024-2708223.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/2c66d9cf66ed/IJG2024-2708223.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/2a55af89d589/IJG2024-2708223.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/3d98f13f2e3a/IJG2024-2708223.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/03c0e2c4febb/IJG2024-2708223.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/00f9c48e959d/IJG2024-2708223.008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/0a8aae43075d/IJG2024-2708223.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/f040952dbed3/IJG2024-2708223.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/1d912d0d7c42/IJG2024-2708223.003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/2c66d9cf66ed/IJG2024-2708223.004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/2a55af89d589/IJG2024-2708223.005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/3d98f13f2e3a/IJG2024-2708223.006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/03c0e2c4febb/IJG2024-2708223.007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/baa1/11410410/00f9c48e959d/IJG2024-2708223.008.jpg

相似文献

1
Genome-Wide Characterization and Analysis of the Gene Family in .. 中基因家族的全基因组特征分析
Int J Genomics. 2024 Sep 11;2024:2708223. doi: 10.1155/2024/2708223. eCollection 2024.
2
Genome-wide identification and expression analysis of GRAS gene family in Eucalyptus grandis.基因组范围内鉴定和表达分析桉树 GRAS 基因家族。
BMC Plant Biol. 2024 Jun 18;24(1):573. doi: 10.1186/s12870-024-05288-x.
3
Genome-wide identification and analysis of SPL gene family in chickpea (Cicer arietinum L.).菜豆基因组范围内 SPL 基因家族的鉴定和分析。
Protoplasma. 2024 Jul;261(4):799-818. doi: 10.1007/s00709-024-01936-z. Epub 2024 Feb 21.
4
Genome-wide analysis of Eucalyptus grandis WRKY genes family and their expression profiling in response to hormone and abiotic stress treatment.基因组范围内分析巨桉 WRKY 基因家族及其对激素和非生物胁迫处理的表达谱。
Gene. 2018 Dec 15;678:38-48. doi: 10.1016/j.gene.2018.08.003. Epub 2018 Aug 2.
5
Genome-Wide Identification and Expression Analysis of Nitrate Transporter (NRT) Gene Family in .在 中全基因组鉴定和硝酸盐转运体(NRT)基因家族的表达分析。
Genes (Basel). 2024 Jul 17;15(7):930. doi: 10.3390/genes15070930.
6
Genome-Wide Identification of Heat Shock Transcription Factor Family and Their Transcriptional Analysis under Salt and Temperature Stresses.全基因组鉴定热休克转录因子家族及其在盐和温度胁迫下的转录分析。
Int J Mol Sci. 2022 Jul 21;23(14):8044. doi: 10.3390/ijms23148044.
7
Genome-Wide Identification and Characterization of Family Genes in .泛基因组鉴定与 家族基因的特征分析
Genes (Basel). 2022 Aug 16;13(8):1455. doi: 10.3390/genes13081455.
8
Genome-Wide Analysis of /miR156 Module and Its Expression Analysis in Vegetative and Reproductive Organs of Oil Palm ().油棕营养和生殖器官中 /miR156 模块的全基因组分析及其表达分析()。
Int J Mol Sci. 2023 Sep 4;24(17):13658. doi: 10.3390/ijms241713658.
9
Genome-wide identification and expression analysis of the SPL gene family and its response to abiotic stress in barley (Hordeum vulgare L.).全基因组鉴定和大麦 SPL 基因家族的表达分析及其对非生物胁迫的响应。
BMC Genomics. 2024 Sep 9;25(1):846. doi: 10.1186/s12864-024-10773-6.
10
Genome-Wide Analysis of the Gene Family and Expression Analysis during Flowering Induction in × 'Somei-yoshino'.利用 × 'Somei-yoshino' 进行开花诱导过程中的基因家族全基因组分析和表达分析。
Int J Mol Sci. 2022 Sep 2;23(17):10052. doi: 10.3390/ijms231710052.

本文引用的文献

1
Profiling of the gene expression and alternative splicing landscapes of Eucalyptus grandis.桉树基因表达和选择性剪接景观的分析。
Plant Cell Environ. 2024 Apr;47(4):1363-1378. doi: 10.1111/pce.14814. Epub 2024 Jan 15.
2
Identification of Alfalfa SPL gene family and expression analysis under biotic and abiotic stresses.鉴定紫花苜蓿 SPL 基因家族及其在生物和非生物胁迫下的表达分析。
Sci Rep. 2023 Jan 3;13(1):84. doi: 10.1038/s41598-022-26911-7.
3
Genome-wide identification and expression analysis of the SPL transcription factor family and its response to abiotic stress in Quinoa (Chenopodium quinoa).
藜科作物全基因组鉴定和 SPL 转录因子家族的表达分析及其对非生物胁迫的响应。
BMC Genomics. 2022 Nov 25;23(1):773. doi: 10.1186/s12864-022-08977-9.
4
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data.TBtools:一个用于生物大数据交互式分析的集成工具包。
Mol Plant. 2020 Aug 3;13(8):1194-1202. doi: 10.1016/j.molp.2020.06.009. Epub 2020 Jun 23.
5
miR156a-targeted SBP-Box transcription factor SlSPL13 regulates inflorescence morphogenesis by directly activating SFT in tomato.miR156a 靶向的 SBP 框转录因子 SlSPL13 通过直接激活番茄中的 SFT 来调控花序形态发生。
Plant Biotechnol J. 2020 Aug;18(8):1670-1682. doi: 10.1111/pbi.13331. Epub 2020 Jan 25.
6
Expression Pattern of and miR156-Targeted Genes Associated with Developmental Stages in .在 中与发育阶段相关的 和 miR156 靶向基因的表达模式。
Int J Mol Sci. 2019 Jun 3;20(11):2725. doi: 10.3390/ijms20112725.
7
Molecular Characterization of Gene Family in .XX中基因家族的分子特征分析 (原文中“in.”后面内容缺失,这是根据现有内容尽量完整的翻译)
Front Plant Sci. 2018 May 4;9:608. doi: 10.3389/fpls.2018.00608. eCollection 2018.
8
Genome-wide identification and characterization of the SBP-box gene family in Petunia.在矮牵牛中 SBP-box 基因家族的全基因组鉴定和特征分析
BMC Genomics. 2018 Mar 12;19(1):193. doi: 10.1186/s12864-018-4537-9.
9
SPL7 locally regulates copper-homeostasis-related genes in Arabidopsis.SPL7 在拟南芥中局部调控铜稳态相关基因。
J Plant Physiol. 2018 May-Jun;224-225:137-143. doi: 10.1016/j.jplph.2018.03.014. Epub 2018 Mar 29.
10
SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 controls floral organ development and plant fertility by activating ASYMMETRIC LEAVES 2 in Arabidopsis thaliana.SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 通过激活拟南芥中的 ASYMMETRIC LEAVES 2 来控制花器官发育和植物育性。
Plant Mol Biol. 2016 Dec;92(6):661-674. doi: 10.1007/s11103-016-0536-x. Epub 2016 Sep 7.