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污水中检出与疫情相关的 Baildon 病毒,表明污水监测如何能补充传统疾病监测。

Outbreak-associated Baildon found in wastewater demonstrates how sewage monitoring can supplement traditional disease surveillance.

机构信息

Division of Infectious Disease Epidemiology, Pennsylvania Department of Health, Harrisburg, Pennsylvania, USA.

Center for Clinical Epidemiology and Biostatistics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

出版信息

J Clin Microbiol. 2024 Oct 16;62(10):e0082524. doi: 10.1128/jcm.00825-24. Epub 2024 Sep 19.

Abstract

Non-typhoidal is a common cause of gastroenteritis worldwide, but current non-typhoidal surveillance is suboptimal. Here, we evaluated the utility of wastewater monitoring to enhance traditional surveillance for this foodborne pathogen. In June 2022, we tested raw sewage collected twice a week from two treatment plants in central Pennsylvania for non-typhoidal and characterized isolates using whole-genome sequencing. We recovered 43 isolates from wastewater samples, differentiated by genomic analysis into seven serovars: 16 Panama (37.2%), 9 Senftenberg (20.9%), 8 Baildon (18.6%), and 3 or fewer of four other serovars. We assessed genetic relatedness and epidemiologic links between these wastewater isolates with those from patients with salmonellosis. All . Baildon isolates from wastewater were genetically similar to those associated with a known contemporaneous salmonellosis outbreak. . Baildon from wastewater and 42 outbreak-related isolates in the national outbreak detection database had the same core genome multilocus sequence typing, and outbreak code differed by zero or one single polynucleotide polymorphism. One of the 42 outbreak-related isolates was obtained from a patient residing in the wastewater sample collection catchment area, which serves approximately 17000 people. . Baildon is a rare serovar (reported in <1% cases nationally, over five years). Our study underscores the value of monitoring sewage from a defined population to supplement traditional surveillance methods for the evidence of infections and to determine the extent of outbreaks.IMPORTANCEDuring the COVID-19 pandemic, monitoring for SARS-CoV-2 in wastewater was highly effective in identifying the variants of concern earlier than clinical surveillance methods. Here, we show that monitoring domestic sewage can also augment traditional reporting of foodborne illnesses to public health authorities. Our study detected multiple serovars in samples from two wastewater treatment plants in central Pennsylvania. Using whole-genome sequencing, we demonstrated that the isolates of variant . Baildon clustered with those from a foodborne salmonellosis outbreak that occurred in a similar time frame. Cases were primarily from Pennsylvania, and one individual lived within the wastewater treatment catchment area. This study highlights the effectiveness of domestic sewage testing as a proactive public health strategy to track and respond to infectious disease outbreaks.

摘要

非伤寒型是一种常见的全球范围内的肠胃炎病因,但目前对非伤寒型的监测并不完善。在这里,我们评估了污水监测在增强这种食源性病原体的传统监测方面的效用。2022 年 6 月,我们每周两次从宾夕法尼亚州中部的两个处理厂采集的原始污水中测试非伤寒型,并使用全基因组测序对分离株进行特征描述。我们从污水样本中回收了 43 株分离株,通过基因组分析分为 7 种血清型:16 株巴拿马型(37.2%)、9 株森夫登堡型(20.9%)、8 株拜尔登型(18.6%)以及 3 株或更少的其他 4 种血清型。我们评估了这些污水分离株与沙门氏菌病患者之间的遗传相关性和流行病学联系。所有来自污水的拜尔登型分离株在遗传上与已知的同期沙门氏菌病爆发相关。污水中的拜尔登型和国家爆发检测数据库中的 42 个爆发相关分离株具有相同的核心基因组多位点序列分型,爆发代码相差零个或一个单核苷酸多态性。在与 42 个爆发相关的分离株中,有一个是从居住在污水样本采集流域范围内的患者中获得的,该流域服务约 17000 人。拜尔登型是一种罕见的血清型(在全国范围内报告的病例中不到 1%,超过五年)。我们的研究强调了从特定人群中监测污水以补充传统监测方法来检测感染证据并确定爆发范围的价值。

重要的是,在 COVID-19 大流行期间,监测污水中的 SARS-CoV-2 能够比临床监测方法更早地识别出关注的变异株。在这里,我们表明,监测家庭污水也可以补充向公共卫生当局报告食源性疾病的传统方法。我们的研究在宾夕法尼亚州中部的两个污水处理厂的样本中检测到了多种沙门氏菌血清型。使用全基因组测序,我们证明了拜尔登型变异株的分离株与在相似时间范围内发生的食源性沙门氏菌病爆发的分离株聚类。病例主要来自宾夕法尼亚州,有一个人住在污水处理流域范围内。这项研究强调了家庭污水检测作为一种主动的公共卫生策略的有效性,以跟踪和应对传染病爆发。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82eb/11481576/00a769963d89/jcm.00825-24.f001.jpg

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