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分子对接作为一种工具,用于发现疾病管理中营养保健品的分子靶标。

Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management.

机构信息

Department of Biochemistry, Faculty of Sciences, Ebonyi State University, Abakaliki, Nigeria.

Department of Science Laboratory Technology (Biochemistry Option), Our Savior Institute of Science, Agriculture, and Technology, Enugu, Nigeria.

出版信息

Sci Rep. 2023 Aug 17;13(1):13398. doi: 10.1038/s41598-023-40160-2.

Abstract

Molecular docking is a computational technique that predicts the binding affinity of ligands to receptor proteins. Although it has potential uses in nutraceutical research, it has developed into a formidable tool for drug development. Bioactive substances called nutraceuticals are present in food sources and can be used in the management of diseases. Finding their molecular targets can help in the creation of disease-specific new therapies. The purpose of this review was to explore molecular docking's application to the study of dietary supplements and disease management. First, an overview of the fundamentals of molecular docking and the various software tools available for docking was presented. The limitations and difficulties of using molecular docking in nutraceutical research are also covered, including the reliability of scoring functions and the requirement for experimental validation. Additionally, there was a focus on the identification of molecular targets for nutraceuticals in numerous disease models, including those for sickle cell disease, cancer, cardiovascular, gut, reproductive, and neurodegenerative disorders. We further highlighted biochemistry pathways and models from recent studies that have revealed molecular mechanisms to pinpoint new nutraceuticals' effects on disease pathogenesis. It is convincingly true that molecular docking is a useful tool for identifying the molecular targets of nutraceuticals in the management of diseases. It may offer information about how nutraceuticals work and support the creation of new therapeutics. Therefore, molecular docking has a bright future in nutraceutical research and has a lot of potentials to lead to the creation of brand-new medicines for the treatment of disease.

摘要

分子对接是一种预测配体与受体蛋白结合亲和力的计算技术。尽管它在营养保健品研究中有潜在的用途,但它已经发展成为药物开发的强大工具。生物活性物质,称为营养保健品,存在于食物来源中,可以用于疾病的管理。找到它们的分子靶标可以帮助创建针对特定疾病的新疗法。本综述的目的是探讨分子对接在膳食补充剂和疾病管理研究中的应用。首先,介绍了分子对接的基本原理和用于对接的各种软件工具。还涵盖了分子对接在营养保健品研究中的局限性和困难,包括评分函数的可靠性和实验验证的要求。此外,还重点介绍了在许多疾病模型中鉴定营养保健品的分子靶标,包括镰状细胞病、癌症、心血管、肠道、生殖和神经退行性疾病的模型。我们进一步强调了最近研究中的生物化学途径和模型,这些研究揭示了分子机制,以确定新的营养保健品对疾病发病机制的影响。可以肯定的是,分子对接是一种用于识别营养保健品在疾病管理中分子靶标的有用工具。它可以提供有关营养保健品如何发挥作用的信息,并支持新疗法的开发。因此,分子对接在营养保健品研究中有广阔的前景,并且有很大的潜力为治疗疾病创造全新的药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/398d/10435576/6089ab68e965/41598_2023_40160_Fig1_HTML.jpg

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