Division of Biochemistry and Interdisciplinary Plant Grou, C.S. Bond Life Sciences Center, University of Missouri , Columbia, MO 65211, USA.
Center for Bioinformatics, NITTE University Centre , Mangaluru 575018, India.
Philos Trans R Soc Lond B Biol Sci. 2024 Nov 18;379(1914):20230353. doi: 10.1098/rstb.2023.0353. Epub 2024 Sep 30.
The committed step for de novo fatty acid (FA) synthesis is the ATP-dependent carboxylation of acetyl-coenzyme A catalysed by acetyl-CoA carboxylase (ACCase). In most plants, ACCase is a multi-subunit complex orthologous to prokaryotes. However, unlike prokaryotes, the plant and algal orthologues are comprised both catalytic and additional dedicated regulatory subunits. Novel regulatory subunits, biotin lipoyl attachment domain-containing proteins (BADC) and carboxyltransferase interactors (CTI) (both three-gene families in ) represent new effectors specific to plants and certain algal species. The evolutionary history of these genes in autotrophic eukaryotes remains elusive, making it an ongoing area of research. Analyses of potential protein-protein and co-occurrence interactions, informed by gene network patterns using the STRING database, in and unveil intricate gene associations with ACCase, suggesting a complex interplay between FA synthesis and other cellular processes. Among both species, a higher number of co-expressed genes was identified in , indicating a wider potential regulatory network of ACCase in plants. This review investigates the extent to which these genes arose in autotrophic eukaryotes and provides insights into their evolutionary trajectory. This article is part of the theme issue 'The evolution of plant metabolism'.
从头开始合成脂肪酸 (FA) 的关键步骤是乙酰辅酶 A 羧化酶 (ACCase) 催化的乙酰辅酶 A 的 ATP 依赖性羧化。在大多数植物中,ACCase 是一种与原核生物同源的多亚基复合物。然而,与原核生物不同的是,植物和藻类的同源物既包含催化亚基,又包含专门的调节亚基。新型调节亚基生物素酰基辅酶 A 连接域蛋白 (BADC) 和羧基转移酶相互作用蛋白 (CTI)(两者均为三基因家族)是专门针对植物和某些藻类物种的新效应物。这些基因在自养真核生物中的进化历史仍然难以捉摸,这是一个正在进行的研究领域。使用 STRING 数据库的基因网络模式对潜在蛋白-蛋白和共发生相互作用进行分析,揭示了与 ACCase 之间错综复杂的基因关联,表明 FA 合成与其他细胞过程之间存在复杂的相互作用。在这两个物种中,在 中鉴定出更多的共表达基因,表明植物中 ACCase 的潜在调控网络更为广泛。这篇综述探讨了这些基因在自养真核生物中出现的程度,并深入了解了它们的进化轨迹。本文是“植物代谢的进化”主题特刊的一部分。