Gurtoo Sumrati, Kotimoole Chinmaya Narayana, Sahana K S, Arun A B
Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to Be University), Mangalore, 575018 India.
Yenepoya Medical College and Hospital, Yenepoya (Deemed to Be University), Mangalore, 575018 India.
Indian J Clin Biochem. 2024 Oct;39(4):506-518. doi: 10.1007/s12291-023-01143-2. Epub 2023 Jul 25.
Hypoxic-ischemic encephalopathy (HIE) is a severe birth complication affecting neonates. Around 40-60% of affected neonates die by two years of age or have severe disabilities and neurodevelopmental delays. The early assessments of brain injury using traditional clinical and biochemical indicators do not always align with its severity and recovery. This delays identifying neonates who may benefit from adjuvant therapeutic strategies and monitoring therapy response. Our aim was to identify specific proteins using proteomic approach to predict the severity of neonatal asphyxia so that its outcome can also be prevented. To achieve this goal a case-control study was conducted on 38 neonates, and serum and urine samples were collected within 24 h of life. Clinical findings, biochemical parameters, and outcomes of the neonates were recorded. A tandem mass spectrometry-based quantitative proteomics approach was used to identify proteins in the serum and urine of HIE neonates. Bioinformatics analyses were performed to assess the potential features and competence of the identified differentially expressed proteins. This resulted in identification of 51 differentially expressed proteins which were found common to both serum and urine proteomic data. Some of the promising biomarkers found were APOD, ORM1, SOD1, and FABP1. These proteins were associated with the pathways like Amyloid fiber formation, diseases of programmed cell death, detoxification of reactive oxygen species, and neurodegenerative diseases. This study will pave the way for identifying the biomarkers (proteins) that can screen neonates for brain injury and monitor the disease progression, which may reduce mortality and neurodevelopmental impairment.
The online version contains supplementary material available at 10.1007/s12291-023-01143-2.
缺氧缺血性脑病(HIE)是一种影响新生儿的严重出生并发症。约40%-60%的受影响新生儿在两岁前死亡,或有严重残疾和神经发育迟缓。使用传统临床和生化指标对脑损伤进行的早期评估并不总是与其严重程度和恢复情况相符。这延误了识别可能从辅助治疗策略中受益并监测治疗反应的新生儿。我们的目标是使用蛋白质组学方法鉴定特定蛋白质,以预测新生儿窒息的严重程度,从而也能预防其后果。为实现这一目标,对38名新生儿进行了病例对照研究,并在出生后24小时内采集了血清和尿液样本。记录了新生儿的临床发现、生化参数和结局。使用基于串联质谱的定量蛋白质组学方法鉴定HIE新生儿血清和尿液中的蛋白质。进行了生物信息学分析,以评估所鉴定的差异表达蛋白质的潜在特征和能力。这导致鉴定出51种差异表达蛋白质,这些蛋白质在血清和尿液蛋白质组数据中均常见。发现的一些有前景的生物标志物是载脂蛋白D(APOD)、α1抗胰蛋白酶(ORM1)、超氧化物歧化酶1(SOD1)和脂肪酸结合蛋白1(FABP1)。这些蛋白质与淀粉样纤维形成、程序性细胞死亡疾病、活性氧解毒和神经退行性疾病等途径相关。这项研究将为鉴定能够筛查新生儿脑损伤并监测疾病进展的生物标志物(蛋白质)铺平道路,这可能降低死亡率和神经发育障碍。
在线版本包含可在10.1007/s12291-023-01143-2获取的补充材料。