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金标克隆技术在合成酵母中高效生物合成番茄红素的应用。

Golden Gate Cloning for Efficient Biosynthesis of Lycopene in Synthetic Yeast.

机构信息

BGI Research, Shenzhen, China.

BGI Research, Hangzhou, China.

出版信息

Methods Mol Biol. 2025;2850:417-434. doi: 10.1007/978-1-0716-4220-7_23.

DOI:10.1007/978-1-0716-4220-7_23
PMID:39363085
Abstract

Golden Gate Assembly (GGA) represents a versatile method for assembling multiple DNA fragments into a single molecule, which is widely used in rapid construction of complex expression cassettes for metabolic engineering. Here we describe the GGA method for facile construction and optimization of lycopene biosynthesis pathway by the combinatorial assembly of different transcriptional units (TUs). Furthermore, we report the method for characterizing and improving lycopene production in the synthetic yeast chassis.

摘要

金门装配(GGA)代表了一种将多个 DNA 片段组装成单个分子的通用方法,广泛用于代谢工程中复杂表达盒的快速构建。在这里,我们描述了通过不同转录单元(TU)的组合装配来轻松构建和优化番茄红素生物合成途径的 GGA 方法。此外,我们还报告了用于表征和提高合成酵母底盘中番茄红素产量的方法。

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本文引用的文献

1
A User's Guide to Golden Gate Cloning Methods and Standards.金标准克隆方法及应用用户指南
ACS Synth Biol. 2022 Nov 18;11(11):3551-3563. doi: 10.1021/acssynbio.2c00355. Epub 2022 Nov 2.
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Systematic dissection of key factors governing recombination outcomes by GCE-SCRaMbLE.通过 GCE-SCRaMbLE 系统剖析控制重组结果的关键因素。
Nat Commun. 2022 Oct 3;13(1):5836. doi: 10.1038/s41467-022-33606-0.
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Rapid 40 kb Genome Construction from 52 Parts through Data-optimized Assembly Design.通过数据优化的组装设计,从 52 个部分快速构建 40kb 基因组。
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Systematical Engineering of Synthetic Yeast for Enhanced Production of Lycopene.用于提高番茄红素产量的合成酵母系统工程
Bioengineering (Basel). 2021 Jan 19;8(1):14. doi: 10.3390/bioengineering8010014.
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Rapid pathway prototyping and engineering using in vitro and in vivo synthetic genome SCRaMbLE-in methods.利用体外和体内合成基因组 SCRaMbLE-in 方法进行快速途径的原型设计和工程改造。
Nat Commun. 2018 May 22;9(1):1936. doi: 10.1038/s41467-018-04254-0.
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Nat Commun. 2018 May 22;9(1):1932. doi: 10.1038/s41467-018-03143-w.
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Science. 2017 Mar 10;355(6329):1040-1044. doi: 10.1126/science.aaf4557.
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Nucleic Acids Res. 2015 Jul 27;43(13):e88. doi: 10.1093/nar/gkv464. Epub 2015 May 8.
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Synthetic chromosome arms function in yeast and generate phenotypic diversity by design.人工合成染色体臂在酵母中具有功能,并通过设计产生表型多样性。
Nature. 2011 Sep 14;477(7365):471-6. doi: 10.1038/nature10403.
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